RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 TRAPPC3O43617 180 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 HLA-DRAP01903 254 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 C4BPAP04003 597 aaKnown RBP12.67□□□□□ -0.38
VTN-202ENST00000539746 THP07101 528 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 KRT19P08727 400 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 IQCF3P0C7M6 154 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 GHRP10912 638 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 PRKCIP41743 596 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 PDE6CP51160 858 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 NOP14P78316 857 aaKnown RBP12.67□□□□□ -0.38
VTN-202ENST00000539746 PPP3CAQ08209 521 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 GRIK3Q13003 919 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 IKBKEQ14164 716 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 BMS1Q14692 1282 aaKnown RBP12.67□□□□□ -0.38
VTN-202ENST00000539746 LPIN1Q14693 890 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 CBWD6Q4V339 395 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 CBWD3Q5JTY5 395 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 CBWD5Q5RIA9 395 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 EEF1DP3Q658K8 133 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 TRIM72Q6ZMU5 477 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 DPH6Q7L8W6 267 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 UBE2TQ9NPD8 197 aaPredicted RBP12.67□□□□□ -0.38
VTN-202ENST00000539746 KCND1Q9NSA2 647 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 TMEM161AQ9NX61 479 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 DPP3Q9NY33 737 aa12.67□□□□□ -0.38
VTN-202ENST00000539746 LACTBL1A8MY62 500 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 F8VZ95 297 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 KRT86O43790 486 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 RECQL4O94761 1208 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 BAIAP3O94812 1187 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 ASS1P00966 412 aaKnown RBP12.66□□□□□ -0.38
VTN-202ENST00000539746 DESP17661 470 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 ADKP55263 362 aaKnown RBP12.66□□□□□ -0.38
VTN-202ENST00000539746 SLC8A3P57103 927 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 OSTNP61366 133 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
VTN-202ENST00000539746 XKR4Q5GH76 650 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 ZNF668Q96K58 619 aaPredicted RBP12.66□□□□□ -0.38
VTN-202ENST00000539746 FAM193BQ96PV7 902 aaPredicted RBP12.66□□□□□ -0.38
VTN-202ENST00000539746 ADAM2Q99965 735 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 OXCT2Q9BYC2 517 aaPredicted RBP12.66□□□□□ -0.38
VTN-202ENST00000539746 MTMR12Q9C0I1 747 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 GANQ9H2C0 597 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 TSPYL2Q9H2G4 693 aaPredicted RBP12.66□□□□□ -0.38
VTN-202ENST00000539746 PDCL3Q9H2J4 239 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 TMX1Q9H3N1 280 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 RSAD1Q9HA92 442 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 MYO1AQ9UBC5 1043 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 PCDHB7Q9Y5E2 793 aa12.66□□□□□ -0.38
VTN-202ENST00000539746 ABHD14A-ACY1A0A1B0GW23 586 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 LRRC53A6NM62 1247 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 ESPNB1AK53 854 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 EIF3CLB5ME19 914 aaKnown RBP12.65□□□□□ -0.38
VTN-202ENST00000539746 SLC9A1P19634 815 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 CD52P31358 61 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 FXR1P51114 621 aaKnown RBP eCLIP12.65□□□□□ -0.38
VTN-202ENST00000539746 DLG4P78352 724 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 IRX5P78411 483 aaPredicted RBP12.65□□□□□ -0.38
VTN-202ENST00000539746 KCNMA1Q12791 1236 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 ELAVL2Q12926 359 aaKnown RBP12.65□□□□□ -0.38
VTN-202ENST00000539746 CUL2Q13617 745 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 SLC10A6Q3KNW5 377 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 ARHGAP29Q52LW3 1261 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 TDRD10Q5VZ19 366 aaKnown RBP12.65□□□□□ -0.38
VTN-202ENST00000539746 JADE1Q6IE81 842 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 CNKSR3Q6P9H4 555 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 TMEM86AQ8N2M4 240 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 TAS1R2Q8TE23 839 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 TMEM40Q8WWA1 233 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 ZBTB10Q96DT7 871 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 HPDLQ96IR7 371 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 NOX5Q96PH1 765 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 EIF3CQ99613 913 aaKnown RBP12.65□□□□□ -0.38
VTN-202ENST00000539746 NLRC4Q9NPP4 1024 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 SNTG2Q9NY99 539 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 INTUQ9ULD6 942 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 ATP11BQ9Y2G3 1177 aa12.65□□□□□ -0.38
VTN-202ENST00000539746 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
VTN-202ENST00000539746 FRMPD3Q5JV73 1810 aa12.65□□□□□ -0.39
VTN-202ENST00000539746 SMIM28A0A1B0GU29 152 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 INPPL1O15357 1258 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 HUS1O60921 280 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 CSDE1O75534 798 aaKnown RBP12.64□□□□□ -0.39
VTN-202ENST00000539746 CXCL10P02778 98 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 PAEPP09466 180 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 RAG1P15918 1043 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 LRPAP1P30533 357 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 TNFSF9P41273 254 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 TAF6P49848 677 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 JAM2P57087 298 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 TLE2Q04725 743 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 KIF5AQ12840 1032 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 PPIGQ13427 754 aaKnown RBP eCLIP12.64□□□□□ -0.39
VTN-202ENST00000539746 HIC1Q14526 733 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 DSC3Q14574 896 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 DRAP1Q14919 205 aaPredicted RBP12.64□□□□□ -0.39
VTN-202ENST00000539746 PLEKHG4Q58EX7 1191 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 ALKAL1Q6UXT8 129 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 KIAA1328Q86T90 577 aa12.64□□□□□ -0.39
VTN-202ENST00000539746 UNC93AQ86WB7 457 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms