RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 SLC35C1Q96A29 364 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 TUBGCP2Q9BSJ2 902 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 BIRC3Q13489 604 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 MAN2A1Q16706 1144 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 OR5B17Q8NGF7 314 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 C18orf25Q96B23 403 aaPredicted RBP16.67■□□□□ 0.26
DDB1-216ENST00000539739 MTMR12Q9C0I1 747 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 HSD3B7Q9H2F3 369 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 MMRN2Q9H8L6 949 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 TMEM8AQ9HCN3 771 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 DPP3Q9NY33 737 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 RALGAPA2Q2PPJ7 1873 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 CARNS1A5YM72 827 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 PES1O00541 588 aaKnown RBP16.66■□□□□ 0.26
DDB1-216ENST00000539739 N4BP1O75113 896 aaKnown RBP16.66■□□□□ 0.26
DDB1-216ENST00000539739 PHACTR2O75167 634 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 AFPP02771 609 aaKnown RBP16.66■□□□□ 0.26
DDB1-216ENST00000539739 RPL9P32969 192 aaKnown RBP16.66■□□□□ 0.26
DDB1-216ENST00000539739 GCLMP48507 274 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 RABGGTBP53611 331 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 CETN1Q12798 172 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 KCNH2Q12809 1159 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 KRT31Q15323 416 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 NAB2Q15742 525 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 C1orf220Q5T0J3 134 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 KRT39Q6A163 491 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 GAS2L3Q86XJ1 694 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 ZNF280BQ86YH2 543 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 DDX27Q96GQ7 796 aaKnown RBP16.66■□□□□ 0.26
DDB1-216ENST00000539739 UROC1Q96N76 676 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 PRO3102Q9H379 93 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 NRDE2Q9H7Z3 1164 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 TUBGCP4Q9UGJ1 667 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 LIMA1Q9UHB6 759 aaKnown RBP16.66■□□□□ 0.26
DDB1-216ENST00000539739 ITGA11Q9UKX5 1188 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 PCDHA11Q9Y5I1 949 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 PTPRJQ12913 1337 aa16.66■□□□□ 0.26
DDB1-216ENST00000539739 TRIP11Q15643 1979 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 CASTOR2A6NHX0 329 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 ZC3H11AO75152 810 aaKnown RBP eCLIP16.65■□□□□ 0.26
DDB1-216ENST00000539739 DDHD2O94830 711 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 ALDH2P05091 517 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 ATP1A3P13637 1013 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 MXI1P50539 228 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 PPP3CAQ08209 521 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 DSC1Q08554 894 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 SV2AQ7L0J3 742 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 TRAPPC11Q7Z392 1133 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 COLGALT2Q8IYK4 626 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 ZNF516Q92618 1163 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 TMEM175Q9BSA9 504 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 RBSNQ9H1K0 784 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 AAASQ9NRG9 546 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 MSRAQ9UJ68 235 aa16.65■□□□□ 0.26
DDB1-216ENST00000539739 FNDC1Q4ZHG4 1894 aaPredicted RBP16.65■□□□□ 0.26
DDB1-216ENST00000539739 A0A1W2PPC1 479 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 LRRC10BA6NIK2 292 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 GRXCR1A8MXD5 290 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 C4BPAP04003 597 aaKnown RBP16.64■□□□□ 0.25
DDB1-216ENST00000539739 KRT19P08727 400 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 LRPAP1P30533 357 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 OR1G1P47890 313 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 FMO5P49326 533 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 ALDH7A1P49419 539 aaKnown RBP16.64■□□□□ 0.25
DDB1-216ENST00000539739 RBP5P82980 135 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 SOX4Q06945 474 aaPredicted RBP16.64■□□□□ 0.25
DDB1-216ENST00000539739 TRPC3Q13507 836 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 RAB30Q15771 203 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 ZACNQ401N2 412 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 VWA3BQ502W6 1294 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 FAM109BQ6ICB4 259 aaPredicted RBP16.64■□□□□ 0.25
DDB1-216ENST00000539739 C1orf127Q8N9H9 656 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 SP7Q8TDD2 431 aaPredicted RBP16.64■□□□□ 0.25
DDB1-216ENST00000539739 NDST4Q9H3R1 872 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 CWH43Q9H720 699 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 GOLGA2P5Q9HBQ8 144 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 TAB2Q9NYJ8 693 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 FAN1Q9Y2M0 1017 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 MRPL42Q9Y6G3 142 aaKnown RBP16.64■□□□□ 0.25
DDB1-216ENST00000539739 ANK1P16157 1881 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 PTPRSQ13332 1948 aa16.64■□□□□ 0.25
DDB1-216ENST00000539739 P4HA2O15460 535 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 SERPINC1P01008 464 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 ITGB3P05106 788 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 LAG3P18627 525 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 GUCY2FP51841 1108 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 COPB1P53618 953 aaKnown RBP16.63■□□□□ 0.25
DDB1-216ENST00000539739 FILIP1LQ4L180 1135 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 PRPF38BQ5VTL8 546 aaKnown RBP16.63■□□□□ 0.25
DDB1-216ENST00000539739 TDRD10Q5VZ19 366 aaKnown RBP16.63■□□□□ 0.25
DDB1-216ENST00000539739 VPS16Q9H269 839 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 DNAJB4Q9UDY4 337 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 TDRD15B5MCY1 1934 aaKnown RBP16.63■□□□□ 0.25
DDB1-216ENST00000539739 PODXLO00592 558 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 PMM2O15305 246 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 POLR2BP30876 1174 aaKnown RBP16.63■□□□□ 0.25
DDB1-216ENST00000539739 CLCNKBP51801 687 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 MYL7Q01449 175 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 UPP1Q16831 310 aa16.63■□□□□ 0.25
DDB1-216ENST00000539739 CBWD6Q4V339 395 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 238.7 ms