RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 TAL1P17542 331 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-209ENST00000539584 YARSP54577 528 aaKnown RBP14.1□□□□□ -0.15
UBE3B-209ENST00000539584 PEX3P56589 373 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 PSMC5P62195 406 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 UBXN2AP68543 259 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 DMP1Q13316 513 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-209ENST00000539584 FAM182BQ5T319 152 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 DRICH1Q6PGQ1 229 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-209ENST00000539584 OTUD6AQ7L8S5 288 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 ANKS1BQ7Z6G8 1248 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 KATNAL2Q8IYT4 538 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 ZCCHC9Q8N567 271 aaKnown RBP14.1□□□□□ -0.15
UBE3B-209ENST00000539584 FITM2Q8N6M3 262 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 EXD1Q8NHP7 514 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 CFAP61Q8NHU2 1237 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 MGARPQ8TDB4 240 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 AGAP11Q8TF27 550 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 NSMCE1Q8WV22 266 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 PITPNM3Q9BZ71 974 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 RPL26L1Q9UNX3 145 aaKnown RBP14.1□□□□□ -0.15
UBE3B-209ENST00000539584 ANKRD31Q8N7Z5 1873 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 TISP43B9A030 160 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 H0YCG3 227 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 LIN7AO14910 233 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-209ENST00000539584 GARTP22102 1010 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 ADSSP30520 456 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 ECE1P42892 770 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 NSFP46459 744 aaKnown RBP14.1□□□□□ -0.15
UBE3B-209ENST00000539584 RASSF2P50749 326 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 KCNJ2P63252 427 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 MAEAQ7L5Y9 396 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 CBWD2Q8IUF1 395 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 OGFOD1Q8N543 542 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 ANKRD42Q8N9B4 389 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 TMEM161BQ8NDZ6 487 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 GJD4Q96KN9 370 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-209ENST00000539584 TMEM237Q96Q45 408 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 POP1Q99575 1024 aaKnown RBP14.1□□□□□ -0.15
UBE3B-209ENST00000539584 TDRD3Q9H7E2 651 aaKnown RBP14.1□□□□□ -0.15
UBE3B-209ENST00000539584 CHORDC1Q9UHD1 332 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-209ENST00000539584 ZBTB21Q9ULJ3 1066 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 SCINQ9Y6U3 715 aa14.1□□□□□ -0.15
UBE3B-209ENST00000539584 MROH7Q68CQ1 1323 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 SLC16A4O15374 487 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 TBC1D12O60347 775 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 HNRNPCL1O60812 293 aaKnown RBP14.09□□□□□ -0.15
UBE3B-209ENST00000539584 DKC1O60832 514 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBE3B-209ENST00000539584 DCTN3O75935 186 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 LUC7L3O95232 432 aaKnown RBP14.09□□□□□ -0.15
UBE3B-209ENST00000539584 CYP1A1P04798 512 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-209ENST00000539584 ALDH3A1P30838 453 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 SNX1Q13596 522 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 TKFCQ3LXA3 575 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 BRDTQ58F21 947 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-209ENST00000539584 CHADLQ6NUI6 762 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 SV2AQ7L0J3 742 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 AGGF1Q8N302 714 aaeCLIP14.09□□□□□ -0.15
UBE3B-209ENST00000539584 MAML1Q92585 1016 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 INPP5DQ92835 1189 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 STAMBPL1Q96FJ0 436 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 C1orf112Q9NSG2 853 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 TCEAL9Q9UHQ7 104 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 PCDHAC2Q9Y5I4 1007 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 USH1CQ9Y6N9 552 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 NFASCO94856 1347 aa14.09□□□□□ -0.15
UBE3B-209ENST00000539584 RASA4BC9J798 803 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 RASA4O43374 803 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 TAC1P20366 129 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 RTP1P59025 263 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 KRT76Q01546 638 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 CYP24A1Q07973 514 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 MYO1EQ12965 1108 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 MTMR1Q13613 665 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 SPARCL1Q14515 664 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 NSMFQ6X4W1 530 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 GPD1LQ8N335 351 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 TAS1R2Q8TE23 839 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 SH3TC2Q8TF17 1288 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 FAM151AQ8WW52 585 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 CNKSR1Q969H4 720 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 CCDC127Q96BQ5 260 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 PHACTR1Q9C0D0 580 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 FETUBQ9UGM5 382 aa14.08□□□□□ -0.15
UBE3B-209ENST00000539584 ASTN2O75129 1339 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-209ENST00000539584 MYPNQ86TC9 1320 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 WDR64B1ANS9 1081 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 DDX39AO00148 427 aaKnown RBP14.08□□□□□ -0.16
UBE3B-209ENST00000539584 KRT16P08779 473 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 KRT5P13647 590 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 CREB1P16220 341 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 ATP2A2P16615 1042 aaKnown RBP14.08□□□□□ -0.16
UBE3B-209ENST00000539584 PTGER2P43116 358 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 MAGEA4P43358 317 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 POLGP54098 1239 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-209ENST00000539584 CLDN10P78369 228 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 MPP2Q14168 576 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 ZC3H12AQ5D1E8 599 aaKnown RBP14.08□□□□□ -0.16
UBE3B-209ENST00000539584 WDR44Q5JSH3 913 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 IZUMO3Q5VZ72 239 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 SRRM1Q8IYB3 904 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms