RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 MUC6Q6W4X9 2439 aa20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 CITO14578 2027 aa20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 STX6O43752 255 aa20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 CLTAP09496 248 aa20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 TDGQ13569 410 aa20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 VARS2Q5ST30 1063 aaKnown RBP20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 AXDND1Q5T1B0 1012 aaPredicted RBP20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 DYMQ7RTS9 669 aa20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 GRASPQ7Z6J2 395 aaPredicted RBP20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 KRI1Q8N9T8 703 aaKnown RBP20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 KCNN1Q92952 543 aa20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 USP28Q96RU2 1077 aa20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 FIZ1Q96SL8 496 aa20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 POLIQ9UNA4 740 aa20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 BACE2Q9Y5Z0 518 aa20.79■□□□□ 0.92
TNFRSF1A-212ENST00000539372 HNRNPA1P09651 372 aaKnown RBP eCLIP20.78■□□□□ 0.92
TNFRSF1A-212ENST00000539372 MCM4P33991 863 aa20.78■□□□□ 0.92
TNFRSF1A-212ENST00000539372 NTHL1P78549 312 aa20.78■□□□□ 0.92
TNFRSF1A-212ENST00000539372 ZC2HC1CQ53FD0 456 aaPredicted RBP20.78■□□□□ 0.92
TNFRSF1A-212ENST00000539372 RRAGBQ5VZM2 374 aa20.78■□□□□ 0.92
TNFRSF1A-212ENST00000539372 PRSS33Q8NF86 280 aa20.78■□□□□ 0.92
TNFRSF1A-212ENST00000539372 ST13P5Q8NFI4 369 aaPredicted RBP20.78■□□□□ 0.92
TNFRSF1A-212ENST00000539372 KIF12Q96FN5 646 aa20.78■□□□□ 0.92
TNFRSF1A-212ENST00000539372 PLEKHA5Q9HAU0 1116 aa20.78■□□□□ 0.92
TNFRSF1A-212ENST00000539372 EPS15L1Q9UBC2 864 aa20.78■□□□□ 0.92
TNFRSF1A-212ENST00000539372 STK17AQ9UEE5 414 aa20.78■□□□□ 0.92
TNFRSF1A-212ENST00000539372 TTC26A0AVF1 554 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 LACTBL1A8MY62 500 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 PIGRP01833 764 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 SCP2P22307 547 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 FSHRP23945 695 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 AVPR2P30518 371 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 TXLNAP40222 546 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 ARPP19P56211 112 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 GTF2BQ00403 316 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 NHLH1Q02575 133 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 PPP2R3AQ06190 1150 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 ENOX2Q16206 610 aaKnown RBP20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 SLC39A4Q6P5W5 647 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 SFR1Q86XK3 245 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 MSTO1Q9BUK6 570 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 ZSCAN16Q9H4T2 348 aaPredicted RBP20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 RPF1Q9H9Y2 349 aaKnown RBP20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 IGSF9Q9P2J2 1179 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 WDFY4Q6ZS81 3184 aa20.77■□□□□ 0.92
TNFRSF1A-212ENST00000539372 SYN3O14994 580 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 OGTO15294 1046 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 NARSO43776 548 aaKnown RBP20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 FAM189A1O60320 539 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 XYLBO75191 536 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 HOXA9P31269 272 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 GUCY2FP51841 1108 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ROR1Q01973 937 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 SLC39A14Q15043 492 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 MAP4K3Q8IVH8 894 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 DDX12PQ92771 950 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 FAM212AQ96EL1 285 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 SUSD3Q96L08 255 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 PANK2Q9BZ23 570 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.76■□□□□ 0.912e-6■■□□□ 12.2
TNFRSF1A-212ENST00000539372 DUSP12Q9UNI6 340 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ZDBF2Q9HCK1 2354 aa20.76■□□□□ 0.91
TNFRSF1A-212ENST00000539372 KMT2EQ8IZD2 1858 aa20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 A0A0B4J269 797 aa20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 MYMKA6NI61 221 aa20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 TISP43B9A030 160 aa20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ANKRD63C9JTQ0 380 aa20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 LAMP2P13473 410 aa20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 KYAT1Q16773 422 aa20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 SLC8B1Q6J4K2 584 aa20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 SV2BQ7L1I2 683 aa20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 IKZF4Q9H2S9 585 aa20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 MFSD1Q9H3U5 465 aa20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 HCFC1R1Q9NWW0 138 aa20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 FBXL21Q9UKT6 434 aa20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 PDCD11Q14690 1871 aaKnown RBP20.75■□□□□ 0.91
TNFRSF1A-212ENST00000539372 A0A087X0B3 334 aa20.74■□□□□ 0.91
TNFRSF1A-212ENST00000539372 WDR27A2RRH5 827 aa20.74■□□□□ 0.91
TNFRSF1A-212ENST00000539372 H7C4K7 107 aa20.74■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ZBTB6Q15916 424 aa20.74■□□□□ 0.91
TNFRSF1A-212ENST00000539372 UVSSAQ2YD98 709 aa20.74■□□□□ 0.91
TNFRSF1A-212ENST00000539372 CTXN3Q4LDR2 81 aa20.74■□□□□ 0.91
TNFRSF1A-212ENST00000539372 FOXD4L5Q5VV16 416 aaPredicted RBP20.74■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ITFG1Q8TB96 612 aa20.74■□□□□ 0.91
TNFRSF1A-212ENST00000539372 FOXD4L4Q8WXT5 416 aaPredicted RBP20.74■□□□□ 0.91
TNFRSF1A-212ENST00000539372 SNX21Q969T3 373 aa20.74■□□□□ 0.91
TNFRSF1A-212ENST00000539372 TBC1D7Q9P0N9 293 aa20.74■□□□□ 0.91
TNFRSF1A-212ENST00000539372 FBXL5Q9UKA1 691 aa20.74■□□□□ 0.91
TNFRSF1A-212ENST00000539372 UBQLN1Q9UMX0 589 aaKnown RBP20.74■□□□□ 0.91
TNFRSF1A-212ENST00000539372 TBC1D4O60343 1298 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 LRPAP1P30533 357 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 HOXD11P31277 338 aaPredicted RBP20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ABCD1P33897 745 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 STAT6P42226 847 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 NASPP49321 788 aaPredicted RBP20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 ACOT2P49753 483 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 MRPL58Q14197 206 aaKnown RBP20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 STK38Q15208 465 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 JADE1Q6IE81 842 aa20.73■□□□□ 0.91
TNFRSF1A-212ENST00000539372 CCDC73Q6ZRK6 1079 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms