RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 SMARCA1P28370 1054 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 HOXA7P31268 230 aaPredicted RBP8.98□□□□□ -0.97
TUBD1-206ENST00000539018 VIPR1P32241 457 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 KRT2P35908 639 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 ME1P48163 572 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 RBM5P52756 815 aaKnown RBP eCLIP8.98□□□□□ -0.97
TUBD1-206ENST00000539018 PABPC4Q13310 644 aaKnown RBP eCLIP8.98□□□□□ -0.97
TUBD1-206ENST00000539018 PICALMQ13492 652 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 TKFCQ3LXA3 575 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 FAM47AQ5JRC9 791 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 GALNT17Q6IS24 598 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 TMC6Q7Z403 805 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 NOSTRINQ8IVI9 506 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 NIM1KQ8IY84 436 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 CEP57L1Q8IYX8 460 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 CERS5Q8N5B7 392 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 SEC14L1Q92503 715 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 USP28Q96RU2 1077 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 FEZ1Q99689 392 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 KCNJ15Q99712 375 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 IDI2Q9BXS1 227 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 GTPBP4Q9BZE4 634 aaKnown RBP8.98□□□□□ -0.97
TUBD1-206ENST00000539018 KCNK12Q9HB15 430 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 DACT1Q9NYF0 836 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 SIT1Q9Y3P8 196 aa8.98□□□□□ -0.97
TUBD1-206ENST00000539018 FAM237AA0A1B0GTK4 181 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 KIF2AO00139 706 aaPredicted RBP8.97□□□□□ -0.97
TUBD1-206ENST00000539018 SPTLC2O15270 562 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 RASGRP1O95267 797 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 SCG2P13521 617 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 HSD3B2P26439 372 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 GSDMDP57764 484 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 SRSF3P84103 164 aaKnown RBP8.97□□□□□ -0.97
TUBD1-206ENST00000539018 PRR5P85299 388 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 ASPRV1Q53RT3 343 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 PLEKHG4Q58EX7 1191 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 ANO1Q5XXA6 986 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 CDC42EP5Q6NZY7 148 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 FGD2Q7Z6J4 655 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 ZC3H7AQ8IWR0 971 aaKnown RBP8.97□□□□□ -0.97
TUBD1-206ENST00000539018 DIS3L2Q8IYB7 885 aaKnown RBP8.97□□□□□ -0.97
TUBD1-206ENST00000539018 SCLYQ96I15 445 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 SPZ1Q9BXG8 430 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 SIRT5Q9NXA8 310 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 STX8Q9UNK0 236 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 HCFC2Q9Y5Z7 792 aa8.97□□□□□ -0.97
TUBD1-206ENST00000539018 DICER1Q9UPY3 1922 aaKnown RBP8.97□□□□□ -0.97
TUBD1-206ENST00000539018 MYOCOSA0A1B0GUC4 107 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 BECN2A8MW95 431 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 CCP110O43303 1012 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 WDHD1O75717 1129 aaPredicted RBP8.96□□□□□ -0.98
TUBD1-206ENST00000539018 ZBTB7AO95365 584 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 PARP1P09874 1014 aaKnown RBP8.96□□□□□ -0.98
TUBD1-206ENST00000539018 GNAT1P11488 350 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 DPEP1P16444 411 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 TRAPPC10P48553 1259 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 PLCD1P51178 756 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 GABPAQ06546 454 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 SLC9A5Q14940 896 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 SLC39A14Q15043 492 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 PFKFB3Q16875 520 aaPredicted RBP8.96□□□□□ -0.98
TUBD1-206ENST00000539018 DALRD3Q5D0E6 543 aaKnown RBP8.96□□□□□ -0.98
TUBD1-206ENST00000539018 STEAP3Q658P3 488 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 FAM173BQ6P4H8 233 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 OLFM4Q6UX06 510 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 LINC00301Q8NCQ3 95 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 AGBL3Q8NEM8 1001 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 PCDH19Q8TAB3 1148 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 PIBF1Q8WXW3 757 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 FBXW5Q969U6 566 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 DYNLL2Q96FJ2 89 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 TSPAN17Q96FV3 270 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 MCOLN1Q9GZU1 580 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 PI4KBQ9UBF8 816 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 SEC63Q9UGP8 760 aaKnown RBP8.96□□□□□ -0.98
TUBD1-206ENST00000539018 ATRNL1Q5VV63 1379 aa8.96□□□□□ -0.98
TUBD1-206ENST00000539018 KRIT1O00522 736 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 WNT9AO14904 365 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 CUTAO60888 179 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 PLEKHA8P1O95397 391 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 ADCY5O95622 1261 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 TTLL1O95922 423 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 NOVP48745 357 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 CEBPZQ03701 1054 aaKnown RBP8.95□□□□□ -0.98
TUBD1-206ENST00000539018 SPIRE1Q08AE8 756 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 TNIP1Q15025 636 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 C21orf62-AS1Q17RA5 79 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 SLC4A8Q2Y0W8 1093 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 FAM47CQ5HY64 1035 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 EMC4Q5J8M3 183 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 GPATCH4Q5T3I0 446 aaKnown RBP8.95□□□□□ -0.98
TUBD1-206ENST00000539018 FKBP1CQ5VVH2 108 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 APOBEC3HQ6NTF7 200 aaKnown RBP8.95□□□□□ -0.98
TUBD1-206ENST00000539018 OTOP3Q7RTS5 596 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 KIAA0907Q7Z7F0 614 aaPredicted RBP8.95□□□□□ -0.98
TUBD1-206ENST00000539018 FOXP4Q8IVH2 680 aaPredicted RBP8.95□□□□□ -0.98
TUBD1-206ENST00000539018 CCAR1Q8IX12 1150 aaKnown RBP8.95□□□□□ -0.98
TUBD1-206ENST00000539018 TRIML1Q8N9V2 468 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 FSIP1Q8NA03 581 aa8.95□□□□□ -0.98
TUBD1-206ENST00000539018 PIP4K2CQ8TBX8 421 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms