RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 GAB3Q8WWW8 586 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 TFAP2BQ92481 460 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 ST3GAL5Q9UNP4 418 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 SAMD9LQ8IVG5 1584 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 BCORL1Q5H9F3 1711 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 SUPT6HQ7KZ85 1726 aaKnown RBP2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 CROCC2H7BZ55 1655 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 KDM2BQ8NHM5 1336 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 TCOF1Q13428 1488 aaKnown RBP2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 MBD5Q9P267 1494 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 PPEF2O14830 753 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 YY2O15391 372 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 NRP2O60462 931 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 PLCH2O75038 1416 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 ERN1O75460 977 aaKnown RBP2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 LTA4HP09960 611 aaKnown RBP2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 ELFN1P0C7U0 828 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 KRT10P13645 584 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 EPHB2P29323 1055 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 CCKARP32238 428 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 VAV2P52735 878 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 CLRN1P58418 232 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 RASGRF1Q13972 1273 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 GEN1Q17RS7 908 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 ZBTB41Q5SVQ8 909 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 KIAA1161Q6NSJ0 714 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 FOXR2Q6PJQ5 311 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 ABHD15Q6UXT9 468 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 DLK2Q6UY11 383 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 USP43Q70EL4 1123 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 PDZD4Q76G19 769 aaPredicted RBP2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 YTHDF3Q7Z739 585 aaKnown RBP2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 LNX2Q8N448 690 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 SH2D3AQ9BRG2 576 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 SPRTNQ9H040 489 aaPredicted RBP2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 EBF3Q9H4W6 596 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 CABP5Q9NP86 173 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 GPRC5DQ9NZD1 345 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 KIAA1522Q9P206 1035 aaPredicted RBP2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 REREQ9P2R6 1566 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 KCNE5Q9UJ90 142 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 INO80Q9ULG1 1556 aaPredicted RBP2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 ARHGEF12Q9NZN5 1544 aa2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 GPATCH8Q9UKJ3 1502 aaKnown RBP2.72□□□□□ -1.97
CBX3P4-201ENST00000538909 NEO1Q92859 1461 aa2.71□□□□□ -1.97
CBX3P4-201ENST00000538909 PLXNC1O60486 1568 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 ARHGEF5Q12774 1597 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 CFAP74Q9C0B2 1584 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 MAST1Q9Y2H9 1570 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 TRGV11A0A075B6L2 103 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 CXorf49A8MYA2 514 aaPredicted RBP2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 ADCY6O43306 1168 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 PFKMP08237 780 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 GRIA3P42263 894 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 TFF2Q03403 129 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 PPARAQ07869 468 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 SUPT20HL1Q3ZLR7 823 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 TMCO4Q5TGY1 634 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 CYB5RLQ6IPT4 315 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 ZCCHC8Q6NZY4 707 aaKnown RBP2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 SLC2A7Q6PXP3 512 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 NEK8Q86SG6 692 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 RASAL3Q86YV0 1011 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 COLGALT2Q8IYK4 626 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 REPS2Q8NFH8 660 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 SEMA6DQ8NFY4 1073 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 FBXO18Q8NFZ0 1043 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 FBXL20Q96IG2 436 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 PPP1R10Q96QC0 940 aaKnown RBP2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 ZMAT4Q9H898 229 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 MSRB2Q9Y3D2 182 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 KIDINS220Q9ULH0 1771 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 DNMT1P26358 1616 aaKnown RBP2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 NCOA2Q15596 1464 aa2.71□□□□□ -1.98
CBX3P4-201ENST00000538909 PNPLA7Q6ZV29 1317 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 MIA2Q96PC5 1412 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 RRBP1Q9P2E9 1410 aaKnown RBP2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 KIAA1107Q9UPP5 1409 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 ZFYVE16Q7Z3T8 1539 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 ARHGEF40Q8TER5 1519 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 CCDC151A5D8V7 595 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 PRSS23O95084 383 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 CD1AP06126 327 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 SLC6A2P23975 617 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 PTPN7P35236 360 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 FLT3LGP49771 235 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 ZNF134P52741 427 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 ZNF66Q6ZN08 573 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 ESPNLQ6ZVH7 1005 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 GLB1L2Q8IW92 636 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 HAPLN3Q96S86 360 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 TINF2Q9BSI4 451 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 QTRT1Q9BXR0 403 aaKnown RBP2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 ANO3Q9BYT9 981 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 TRIM39Q9HCM9 518 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 H2AFY2Q9P0M6 372 aaPredicted RBP2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 ZNF112Q9UJU3 913 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 PADI4Q9UM07 663 aa2.7□□□□□ -1.98
CBX3P4-201ENST00000538909 TSPOAP1O95153 1857 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms