RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 MRPL17Q9NRX2 175 aaKnown RBP14.93□□□□□ -0.02
CD9-208ENST00000538834 EXOC7Q9UPT5 735 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 SSX2IPQ9Y2D8 614 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 SF3B1O75533 1304 aaKnown RBP eCLIP14.92□□□□□ -0.02
CD9-208ENST00000538834 DENND4CQ5VZ89 1909 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 ANO9A1A5B4 782 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 H3BQ06 376 aaPredicted RBP14.92□□□□□ -0.02
CD9-208ENST00000538834 KIAA0391O15091 583 aaKnown RBP14.92□□□□□ -0.02
CD9-208ENST00000538834 HARSP12081 509 aaKnown RBP14.92□□□□□ -0.02
CD9-208ENST00000538834 ACOT2P49753 483 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 WNT7BP56706 349 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 SNRPFP62306 86 aaKnown RBP14.92□□□□□ -0.02
CD9-208ENST00000538834 ELAVL2Q12926 359 aaKnown RBP14.92□□□□□ -0.02
CD9-208ENST00000538834 PSMD2Q13200 908 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 BMS1Q14692 1282 aaKnown RBP14.92□□□□□ -0.02
CD9-208ENST00000538834 SMAD2Q15796 467 aaKnown RBP14.92□□□□□ -0.02
CD9-208ENST00000538834 RTP2Q5QGT7 225 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 SPATA1Q5VX52 437 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 ANKRD54Q6NXT1 300 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 C12orf56Q8IXR9 622 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 CEP57L1Q8IYX8 460 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 TMEM130Q8N3G9 435 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 FSIP1Q8NA03 581 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 TMEM87AQ8NBN3 555 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 KIAA0895Q8NCT3 520 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 CXorf38Q8TB03 319 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 SPATA20Q8TB22 786 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 CBWD1Q9BRT8 395 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 RHOBTB2Q9BYZ6 727 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 RPF1Q9H9Y2 349 aaKnown RBP14.92□□□□□ -0.02
CD9-208ENST00000538834 CD207Q9UJ71 328 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 BARX2Q9UMQ3 279 aaPredicted RBP14.92□□□□□ -0.02
CD9-208ENST00000538834 C2CD2Q9Y426 696 aa14.92□□□□□ -0.02
CD9-208ENST00000538834 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.91□□□□□ -0.02
CD9-208ENST00000538834 C19orf67A6NJJ6 358 aa14.91□□□□□ -0.02
CD9-208ENST00000538834 PODXLO00592 558 aa14.91□□□□□ -0.02
CD9-208ENST00000538834 TEX28O15482 410 aa14.91□□□□□ -0.02
CD9-208ENST00000538834 TADA2AO75478 443 aa14.91□□□□□ -0.02
CD9-208ENST00000538834 RHOBTB3O94955 611 aa14.91□□□□□ -0.02
CD9-208ENST00000538834 PRR29P0C7W0 189 aa14.91□□□□□ -0.02
CD9-208ENST00000538834 HOXB8P17481 243 aaPredicted RBP14.91□□□□□ -0.02
CD9-208ENST00000538834 MCCD1P59942 119 aaPredicted RBP14.91□□□□□ -0.02
CD9-208ENST00000538834 STK4Q13043 487 aa14.91□□□□□ -0.02
CD9-208ENST00000538834 SMAD4Q13485 552 aaKnown RBP14.91□□□□□ -0.02
CD9-208ENST00000538834 KMT5BQ4FZB7 885 aa14.91□□□□□ -0.02
CD9-208ENST00000538834 PTCRAQ6ISU1 281 aaPredicted RBP14.91□□□□□ -0.02
CD9-208ENST00000538834 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.91□□□□□ -0.02
CD9-208ENST00000538834 PPFIBP1Q86W92 1011 aa14.91□□□□□ -0.02
CD9-208ENST00000538834 NT5DC4Q86YG4 428 aa14.91□□□□□ -0.02
CD9-208ENST00000538834 BRSK2Q8IWQ3 736 aa14.91□□□□□ -0.02
CD9-208ENST00000538834 ELOA2Q8IYF1 753 aaPredicted RBP14.91□□□□□ -0.02
CD9-208ENST00000538834 CLSTN3Q9BQT9 956 aa14.91□□□□□ -0.02
CD9-208ENST00000538834 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.91□□□□□ -0.02
CD9-208ENST00000538834 TUBGCP4Q9UGJ1 667 aa14.91□□□□□ -0.02
CD9-208ENST00000538834 UBQLN1Q9UMX0 589 aaKnown RBP14.91□□□□□ -0.02
CD9-208ENST00000538834 PTPRDP23468 1912 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 M0QZQ0 153 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 PIRO00625 290 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 B3GAT3O94766 335 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 CSPG5O95196 566 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 LDHAP00338 332 aaKnown RBP14.9□□□□□ -0.02
CD9-208ENST00000538834 URODP06132 367 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 IL9P15248 144 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 EPCAMP16422 314 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 PPP2R3AQ06190 1150 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 KCNB1Q14721 858 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 FAM171A1Q5VUB5 890 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 JADE1Q6IE81 842 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 CLEC17AQ6ZS10 378 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 STXBP4Q6ZWJ1 553 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 EFCAB13Q8IY85 973 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 ADAMTS19Q8TE59 1207 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 HDAC7Q8WUI4 952 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 POMGNT1Q8WZA1 660 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 CASP10Q92851 521 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 BORCS6Q96GS4 357 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 SUSD3Q96L08 255 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 B3GALT6Q96L58 329 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 TIGD1Q96MW7 591 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 TTPALQ9BTX7 342 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 KCTD10Q9H3F6 313 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 PRKAG3Q9UGI9 489 aa14.9□□□□□ -0.02
CD9-208ENST00000538834 EXTL3O43909 919 aa14.89□□□□□ -0.03
CD9-208ENST00000538834 IL18RAPO95256 599 aa14.89□□□□□ -0.03
CD9-208ENST00000538834 MATR3P43243 847 aaKnown RBP eCLIP14.89□□□□□ -0.03
CD9-208ENST00000538834 BRCC3P46736 316 aa14.89□□□□□ -0.03
CD9-208ENST00000538834 NDUFV1P49821 464 aa14.89□□□□□ -0.03
CD9-208ENST00000538834 SPAG1Q07617 926 aa14.89□□□□□ -0.03
CD9-208ENST00000538834 RSPO2Q6UXX9 243 aaPredicted RBP14.89□□□□□ -0.03
CD9-208ENST00000538834 CMASQ8NFW8 434 aaPredicted RBP14.89□□□□□ -0.03
CD9-208ENST00000538834 HASPINQ8TF76 798 aa14.89□□□□□ -0.03
CD9-208ENST00000538834 KIF12Q96FN5 646 aa14.89□□□□□ -0.03
CD9-208ENST00000538834 EMILIN2Q9BXX0 1053 aa14.89□□□□□ -0.03
CD9-208ENST00000538834 GZF1Q9H116 711 aaPredicted RBP14.89□□□□□ -0.03
CD9-208ENST00000538834 SLC39A2Q9NP94 309 aa14.89□□□□□ -0.03
CD9-208ENST00000538834 CD320Q9NPF0 282 aa14.89□□□□□ -0.03
CD9-208ENST00000538834 AGPAT3Q9NRZ7 376 aa14.89□□□□□ -0.03
CD9-208ENST00000538834 DMAC2Q9NW81 257 aa14.89□□□□□ -0.03
CD9-208ENST00000538834 CHMP5Q9NZZ3 219 aa14.89□□□□□ -0.03
CD9-208ENST00000538834 CGNQ9P2M7 1197 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms