RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	C2CD2	Q9Y426	696 aa		13.4	□□□□□ -0.26
CLTCL1-205	ENST00000538828	NR2E1	Q9Y466	385 aa		13.4	□□□□□ -0.26
CLTCL1-205	ENST00000538828	VWA8	A3KMH1	1905 aa		13.4	□□□□□ -0.26
CLTCL1-205	ENST00000538828	TCHH	Q07283	1943 aa		13.4	□□□□□ -0.26
CLTCL1-205	ENST00000538828	C5orf42	Q9H799	3197 aa		13.4	□□□□□ -0.26
CLTCL1-205	ENST00000538828	UBE4B	O95155	1302 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828		F8W810	466 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	POLR2D	O15514	142 aa	Known RBP	13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	MEFV	O15553	781 aa	Predicted RBP	13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	GCNT3	O95395	438 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	SLFN14	P0C7P3	912 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CXCL8	P10145	99 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	SSTR3	P32745	418 aa	Predicted RBP	13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	AARS	P49588	968 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	NUCB2	P80303	420 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	SOX4	Q06945	474 aa	Predicted RBP	13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	EHHADH	Q08426	723 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	RAB33A	Q14088	237 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CLUL1	Q15846	466 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ENOX2	Q16206	610 aa	Known RBP	13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	UVSSA	Q2YD98	709 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	RTP2	Q5QGT7	225 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	LLGL2	Q6P1M3	1020 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	UNC13D	Q70J99	1090 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	LEO1	Q8WVC0	666 aa	Predicted RBP	13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	DHX58	Q96C10	678 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	SUSD3	Q96L08	255 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	SPATA32	Q96LK8	384 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	PANK2	Q9BZ23	570 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CD320	Q9NPF0	282 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	MTRR	Q9UBK8	725 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	AGO2	Q9UKV8	859 aa	Known RBP	13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828	KCNH3	Q9ULD8	1083 aa		13.39	□□□□□ -0.27
CLTCL1-205	ENST00000538828		A0A1W2PQ27	194 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828		A0A1W2PQ64	194 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828		A0A1W2PQD8	194 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ARHGEF37	A1IGU5	675 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828		H7C4K7	107 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	C2CD2L	O14523	706 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	IL18RAP	O95256	599 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	HARS	P12081	509 aa	Known RBP	13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ADSS	P30520	456 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	MRPL58	Q14197	206 aa	Known RBP	13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	PSMD5	Q16401	504 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	SPATA1	Q5VX52	437 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	SLC8B1	Q6J4K2	584 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	PLCD3	Q8N3E9	789 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	SPRYD3	Q8NCJ5	442 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	APPL2	Q8NEU8	664 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	BEST2	Q8NFU1	509 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CLSTN3	Q9BQT9	956 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CGN	Q9P2M7	1197 aa	Known RBP	13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	FBXW11	Q9UKB1	542 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	HPSE	Q9Y251	543 aa		13.38	□□□□□ -0.27
CLTCL1-205	ENST00000538828	LACTBL1	A8MY62	500 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ANKRD63	C9JTQ0	380 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828		M0QZQ0	153 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	TGM5	O43548	720 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	DCX	O43602	365 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	TBC1D4	O60343	1298 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	GPR37L1	O60883	481 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	TNFSF9	P41273	254 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CEP57L1	Q8IYX8	460 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ZDHHC14	Q8IZN3	488 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	C3orf58	Q8NDZ4	430 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ZNF507	Q8TCN5	953 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	TMEM174	Q8WUU8	243 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	POMGNT1	Q8WZA1	660 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	KIF12	Q96FN5	646 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	GOLGA2P5	Q9HBQ8	144 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	KIAA1586	Q9HCI6	787 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	MAN1C1	Q9NR34	630 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	NUB1	Q9Y5A7	615 aa		13.37	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ANK1	P16157	1881 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	PLXNA3	P51805	1871 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	DENND4A	Q7Z401	1863 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ANO9	A1A5B4	782 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ZMYND10	O75800	440 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ASIC1	P78348	528 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	PSMD2	Q13200	908 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	TMEM132D	Q14C87	1099 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	SURF1	Q15526	300 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	BMT2	Q1RMZ1	405 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	SEZ6	Q53EL9	994 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	FAM26F	Q5R3K3	315 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	RARS2	Q5T160	578 aa	Known RBP	13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	TPGS2	Q68CL5	300 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CEP57	Q86XR8	500 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	BRSK2	Q8IWQ3	736 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	SYCP3	Q8IZU3	236 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	KREMEN2	Q8NCW0	462 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	HASPIN	Q8TF76	798 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	RABGGTA	Q92696	567 aa		13.36	□□□□□ -0.27

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