RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 DYMQ7RTS9 669 aa16.33■□□□□ 0.2
RAB40B-202ENST00000538809 SUGP1Q8IWZ8 645 aaKnown RBP16.33■□□□□ 0.2
RAB40B-202ENST00000538809 FBXL6Q8N531 539 aa16.33■□□□□ 0.2
RAB40B-202ENST00000538809 MYADMQ96S97 322 aa16.33■□□□□ 0.2
RAB40B-202ENST00000538809 PRKD2Q9BZL6 878 aa16.33■□□□□ 0.2
RAB40B-202ENST00000538809 STK17AQ9UEE5 414 aa16.33■□□□□ 0.2
RAB40B-202ENST00000538809 ARIH1Q9Y4X5 557 aaPredicted RBP16.33■□□□□ 0.2
RAB40B-202ENST00000538809 CDY1Q9Y6F8 540 aa16.33■□□□□ 0.2
RAB40B-202ENST00000538809 A0A087X0B3 334 aa16.32■□□□□ 0.2
RAB40B-202ENST00000538809 TRAPPC3O43617 180 aa16.32■□□□□ 0.2
RAB40B-202ENST00000538809 C1RP00736 705 aa16.32■□□□□ 0.2
RAB40B-202ENST00000538809 VCPP55072 806 aaKnown RBP16.32■□□□□ 0.2
RAB40B-202ENST00000538809 ZC2HC1CQ53FD0 456 aaPredicted RBP16.32■□□□□ 0.2
RAB40B-202ENST00000538809 PPM1LQ5SGD2 360 aa16.32■□□□□ 0.2
RAB40B-202ENST00000538809 FOXD4L5Q5VV16 416 aaPredicted RBP16.32■□□□□ 0.2
RAB40B-202ENST00000538809 SLC39A4Q6P5W5 647 aa16.32■□□□□ 0.2
RAB40B-202ENST00000538809 CYP26C1Q6V0L0 522 aa16.32■□□□□ 0.2
RAB40B-202ENST00000538809 SFR1Q86XK3 245 aa16.32■□□□□ 0.2
RAB40B-202ENST00000538809 UBALD2Q8IYN6 164 aa16.32■□□□□ 0.2
RAB40B-202ENST00000538809 KRI1Q8N9T8 703 aaKnown RBP16.32■□□□□ 0.2
RAB40B-202ENST00000538809 SLC7A14Q8TBB6 771 aa16.32■□□□□ 0.2
RAB40B-202ENST00000538809 FOXD4L4Q8WXT5 416 aaPredicted RBP16.32■□□□□ 0.2
RAB40B-202ENST00000538809 RHOBTB2Q9BYZ6 727 aa16.32■□□□□ 0.2
RAB40B-202ENST00000538809 CCDC39Q9UFE4 941 aa16.32■□□□□ 0.2
RAB40B-202ENST00000538809 NUB1Q9Y5A7 615 aa16.32■□□□□ 0.2
RAB40B-202ENST00000538809 TISP43B9A030 160 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 CCL16O15467 120 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 PAPLNO95428 1278 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 PIGRP01833 764 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 CLTAP09496 248 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 PDIA4P13667 645 aaKnown RBP16.31■□□□□ 0.2
RAB40B-202ENST00000538809 SCP2P22307 547 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 MCM4P33991 863 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 TXLNAP40222 546 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 GUCY2FP51841 1108 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 NTHL1P78549 312 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 PPP2R3AQ06190 1150 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 RAB33AQ14088 237 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 VARS2Q5ST30 1063 aaKnown RBP16.31■□□□□ 0.2
RAB40B-202ENST00000538809 RRAGBQ5VZM2 374 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 ANKS3Q6ZW76 656 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 STAMQ92783 540 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 KIF12Q96FN5 646 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 POLIQ9UNA4 740 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 MIA3Q5JRA6 1907 aa16.31■□□□□ 0.2
RAB40B-202ENST00000538809 TTC26A0AVF1 554 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 MYMKA6NI61 221 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 OGTO15294 1046 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 FAM189A1O60320 539 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 PPP6R2O75170 966 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 F13A1P00488 732 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 ZSCAN22P10073 491 aaPredicted RBP16.3■□□□□ 0.2
RAB40B-202ENST00000538809 GTF2BQ00403 316 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 PKP1Q13835 747 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 ENOX2Q16206 610 aaKnown RBP16.3■□□□□ 0.2
RAB40B-202ENST00000538809 AXDND1Q5T1B0 1012 aaPredicted RBP16.3■□□□□ 0.2
RAB40B-202ENST00000538809 IER5LQ5T953 404 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 GRASPQ7Z6J2 395 aaPredicted RBP16.3■□□□□ 0.2
RAB40B-202ENST00000538809 MAP4K3Q8IVH8 894 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 ST13P5Q8NFI4 369 aaPredicted RBP16.3■□□□□ 0.2
RAB40B-202ENST00000538809 RSAD2Q8WXG1 361 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 DDX12PQ92771 950 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 DNAJC19Q96DA6 116 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 MSTO1Q9BUK6 570 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 PANK2Q9BZ23 570 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 IKZF4Q9H2S9 585 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 ST6GALNAC4Q9H4F1 302 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 KCNK12Q9HB15 430 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 BACE2Q9Y5Z0 518 aa16.3■□□□□ 0.2
RAB40B-202ENST00000538809 A0A0B4J269 797 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 LACTBL1A8MY62 500 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 ANKRD63C9JTQ0 380 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 SPTLC2O15270 562 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 YEATS4O95619 227 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 HNRNPA1P09651 372 aaKnown RBP eCLIP16.29■□□□□ 0.2
RAB40B-202ENST00000538809 RPL9P32969 192 aaKnown RBP16.29■□□□□ 0.2
RAB40B-202ENST00000538809 STAT6P42226 847 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 ARPP19P56211 112 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 ROR1Q01973 937 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 TDGQ13569 410 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 STK38Q15208 465 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 PRSS33Q8NF86 280 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 FAM212AQ96EL1 285 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 SUSD3Q96L08 255 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 ZNF396Q96N95 335 aaPredicted RBP16.29■□□□□ 0.2
RAB40B-202ENST00000538809 RPF1Q9H9Y2 349 aaKnown RBP16.29■□□□□ 0.2
RAB40B-202ENST00000538809 PLEKHA5Q9HAU0 1116 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 HCFC1R1Q9NWW0 138 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 TBC1D7Q9P0N9 293 aa16.29■□□□□ 0.2
RAB40B-202ENST00000538809 TFIP11Q9UBB9 837 aaKnown RBP16.29■□□□□ 0.2
RAB40B-202ENST00000538809 WDR27A2RRH5 827 aa16.28■□□□□ 0.2
RAB40B-202ENST00000538809 SYN3O14994 580 aa16.28■□□□□ 0.2
RAB40B-202ENST00000538809 NARSO43776 548 aaKnown RBP16.28■□□□□ 0.2
RAB40B-202ENST00000538809 PPP1R37O75864 691 aa16.28■□□□□ 0.2
RAB40B-202ENST00000538809 FSHRP23945 695 aa16.28■□□□□ 0.2
RAB40B-202ENST00000538809 HOXA9P31269 272 aa16.28■□□□□ 0.2
RAB40B-202ENST00000538809 CCDC73Q6ZRK6 1079 aa16.28■□□□□ 0.2
RAB40B-202ENST00000538809 SV2BQ7L1I2 683 aa16.28■□□□□ 0.2
RAB40B-202ENST00000538809 PDILTQ8N807 584 aa16.28■□□□□ 0.2
RAB40B-202ENST00000538809 STRA6Q9BX79 667 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms