RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 FAM84AQ96KN4 292 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 ASB7Q9H672 318 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 PYCARDQ9ULZ3 195 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 LRRIQ3A6PVS8 624 aaPredicted RBP18.62■□□□□ 0.57
CLN6-202ENST00000538696 POMCP01189 267 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 GYPCP04921 128 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 VAMP7P51809 220 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 MCCD1P59942 119 aaPredicted RBP18.62■□□□□ 0.57
CLN6-202ENST00000538696 DLG4P78352 724 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 GRIK3Q13003 919 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 NAB2Q15742 525 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 DCAF17Q5H9S7 520 aaPredicted RBP18.62■□□□□ 0.57
CLN6-202ENST00000538696 C1orf220Q5T0J3 134 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 LMBRD2Q68DH5 695 aaPredicted RBP18.62■□□□□ 0.57
CLN6-202ENST00000538696 TC2NQ8N9U0 490 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 URGCPQ8TCY9 931 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 TMC2Q8TDI7 906 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 PARD3BQ8TEW8 1205 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 KIF12Q96FN5 646 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 PPP1R10Q96QC0 940 aaKnown RBP18.62■□□□□ 0.57
CLN6-202ENST00000538696 CGRRF1Q99675 332 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 TBC1D13Q9NVG8 400 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 HCSTQ9UBK5 93 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 SIK3Q9Y2K2 1263 aa18.62■□□□□ 0.57
CLN6-202ENST00000538696 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.62■□□□□ 0.572e-8■■■□□ 18
CLN6-202ENST00000538696 GRXCR1A8MXD5 290 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 TULP1O00294 542 aaPredicted RBP18.61■□□□□ 0.57
CLN6-202ENST00000538696 B4GALT3O60512 393 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 MFAP3LO75121 409 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 TRIM49P0CI25 452 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 TRIM49CP0CI26 452 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 DLATP10515 647 aaKnown RBP18.61■□□□□ 0.57
CLN6-202ENST00000538696 KRT13P13646 458 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 FXR1P51114 621 aaKnown RBP eCLIP18.61■□□□□ 0.57
CLN6-202ENST00000538696 ADKP55263 362 aaKnown RBP18.61■□□□□ 0.57
CLN6-202ENST00000538696 ENPEPQ07075 957 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 KCNH2Q12809 1159 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 TRIM14Q14142 442 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 SURF1Q15526 300 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 CMTR2Q8IYT2 770 aaKnown RBP18.61■□□□□ 0.57
CLN6-202ENST00000538696 TDHQ8IZJ6 230 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 LRRC43Q8N309 656 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 TMEM130Q8N3G9 435 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 CPLX3Q8WVH0 158 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 RSPH1Q8WYR4 309 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 PCMTD1Q96MG8 357 aaPredicted RBP18.61■□□□□ 0.57
CLN6-202ENST00000538696 YME1L1Q96TA2 773 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 POP1Q99575 1024 aaKnown RBP18.61■□□□□ 0.57
CLN6-202ENST00000538696 MRPL9Q9BYD2 267 aaKnown RBP18.61■□□□□ 0.57
CLN6-202ENST00000538696 DERAQ9Y315 318 aa18.61■□□□□ 0.57
CLN6-202ENST00000538696 ESPNB1AK53 854 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 AKR1B15C9JRZ8 316 aaPredicted RBP18.6■□□□□ 0.57
CLN6-202ENST00000538696 RNF225M0QZC1 329 aaPredicted RBP18.6■□□□□ 0.57
CLN6-202ENST00000538696 AFPP02771 609 aaKnown RBP18.6■□□□□ 0.57
CLN6-202ENST00000538696 CASP14P31944 242 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 RABGGTBP53611 331 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 SOX4Q06945 474 aaPredicted RBP18.6■□□□□ 0.57
CLN6-202ENST00000538696 KCNMA1Q12791 1236 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 TMEM132DQ14C87 1099 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 ZBTB6Q15916 424 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 TCERG1LQ5VWI1 586 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 WDR49Q8IV35 697 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 OR5B17Q8NGF7 314 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 SP7Q8TDD2 431 aaPredicted RBP18.6■□□□□ 0.57
CLN6-202ENST00000538696 SLC35C1Q96A29 364 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 C18orf25Q96B23 403 aaPredicted RBP18.6■□□□□ 0.57
CLN6-202ENST00000538696 FNBP1Q96RU3 617 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 TSPAN18Q96SJ8 248 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 ZBED2Q9BTP6 218 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 TUBGCP4Q9UGJ1 667 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 C2CD2Q9Y426 696 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 SCN1AP35498 2009 aa18.6■□□□□ 0.57
CLN6-202ENST00000538696 TLL1O43897 1013 aa18.59■□□□□ 0.57
CLN6-202ENST00000538696 THP07101 528 aa18.59■□□□□ 0.57
CLN6-202ENST00000538696 GUCY2FP51841 1108 aa18.59■□□□□ 0.57
CLN6-202ENST00000538696 CLDN10P78369 228 aa18.59■□□□□ 0.57
CLN6-202ENST00000538696 NT5DC4Q86YG4 428 aa18.59■□□□□ 0.57
CLN6-202ENST00000538696 ZNF280BQ86YH2 543 aa18.59■□□□□ 0.57
CLN6-202ENST00000538696 ZNF516Q92618 1163 aa18.59■□□□□ 0.57
CLN6-202ENST00000538696 TTYH3Q9C0H2 523 aa18.59■□□□□ 0.57
CLN6-202ENST00000538696 MTMR12Q9C0I1 747 aa18.59■□□□□ 0.57
CLN6-202ENST00000538696 GOLGA2P5Q9HBQ8 144 aa18.59■□□□□ 0.57
CLN6-202ENST00000538696 KANSL3Q9P2N6 904 aa18.59■□□□□ 0.57
CLN6-202ENST00000538696 UBQLN1Q9UMX0 589 aaKnown RBP18.59■□□□□ 0.57
CLN6-202ENST00000538696 INSL6Q9Y581 213 aa18.59■□□□□ 0.57
CLN6-202ENST00000538696 LCHNA4D1U4 455 aa18.58■□□□□ 0.57
CLN6-202ENST00000538696 EPHB6O15197 1021 aa18.58■□□□□ 0.57
CLN6-202ENST00000538696 DDHD2O94830 711 aa18.58■□□□□ 0.57
CLN6-202ENST00000538696 TNNI1P19237 187 aa18.58■□□□□ 0.57
CLN6-202ENST00000538696 TFAMQ00059 246 aaKnown RBP18.58■□□□□ 0.57
CLN6-202ENST00000538696 PPP3CAQ08209 521 aa18.58■□□□□ 0.57
CLN6-202ENST00000538696 DSC1Q08554 894 aa18.58■□□□□ 0.57
CLN6-202ENST00000538696 BTG3Q14201 252 aaPredicted RBP18.58■□□□□ 0.57
CLN6-202ENST00000538696 USP37Q86T82 979 aa18.58■□□□□ 0.57
CLN6-202ENST00000538696 RAD9AQ99638 391 aa18.58■□□□□ 0.57
CLN6-202ENST00000538696 LSM14BQ9BX40 385 aaKnown RBP18.58■□□□□ 0.57
CLN6-202ENST00000538696 CWH43Q9H720 699 aa18.58■□□□□ 0.57
CLN6-202ENST00000538696 NRDE2Q9H7Z3 1164 aa18.58■□□□□ 0.57
CLN6-202ENST00000538696 SLC38A7Q9NVC3 462 aa18.58■□□□□ 0.57
CLN6-202ENST00000538696 CACNG4Q9UBN1 327 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms