RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TRADDQ15628 312 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 ZNF484Q5JVG2 852 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 C17orf99Q6UX52 265 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 RUFY4Q6ZNE9 571 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 TSHZ1Q6ZSZ6 1077 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 LINC01465Q8N7H1 131 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 MSANTD4Q8NCY6 345 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 MYADML2A6NDP7 307 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 ZRANB2O95218 330 aaKnown RBP eCLIP15.15■□□□□ 0.02
ACTN1-205ENST00000538545 CDR1P51861 262 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 CDR2Q01850 454 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 GCNT1Q02742 428 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 CKAP4Q07065 602 aaKnown RBP15.15■□□□□ 0.02
ACTN1-205ENST00000538545 OSMRQ99650 979 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 GNEQ9Y223 722 aaKnown RBP15.15■□□□□ 0.02
ACTN1-205ENST00000538545 CLTAP09496 248 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 CDH8P55286 799 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 LONRF2Q1L5Z9 754 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 DCAF12L1Q5VU92 463 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 KLHL7Q8IXQ5 586 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 KRT35Q92764 455 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 ZNF653Q96CK0 615 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 ISCUQ9H1K1 167 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 C2orf40Q9H1Z8 148 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 PDZD7Q9H5P4 517 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 ARGLU1Q9NWB6 273 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-205ENST00000538545 NR2E1Q9Y466 385 aa15.15■□□□□ 0.02
ACTN1-205ENST00000538545 BTNL10A8MVZ5 291 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 LACTBL1A8MY62 500 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 TNPO2O14787 897 aaKnown RBP15.14■□□□□ 0.01
ACTN1-205ENST00000538545 GAS2O43903 313 aaKnown RBP15.14■□□□□ 0.01
ACTN1-205ENST00000538545 TMEM191BP0C7N4 346 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 STAG3L1P0CL83 205 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 ITGA4P13612 1032 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 TRIM32Q13049 653 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 CYP4F22Q6NT55 531 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 EMID1Q96A84 441 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-205ENST00000538545 LOC102724159A0A0B4J2E5 919 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 FAM155AB1AL88 458 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-205ENST00000538545 PAFAH1B1P43034 410 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 PHKA2P46019 1235 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 PWP2Q15269 919 aaKnown RBP15.14■□□□□ 0.01
ACTN1-205ENST00000538545 IQSEC1Q6DN90 963 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 ALG3Q92685 438 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 KRT12Q99456 494 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 GABRQQ9UN88 632 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 STXBP5LQ9Y2K9 1186 aa15.14■□□□□ 0.01
ACTN1-205ENST00000538545 MANSC4A6NHS7 340 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-205ENST00000538545 TREHO43280 583 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 RTN2O75298 545 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 MYL3P08590 195 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 SMIM10L2AP0DMW4 78 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 SMIM10L2BP0DMW5 78 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 PRLRP16471 622 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 JADE1Q6IE81 842 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 RBBP8NLQ8NC74 664 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-205ENST00000538545 DNAJB3Q8WWF6 145 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 TAF4BQ92750 862 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 MAP7D2Q96T17 732 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 ZSWIM1Q9BR11 485 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 JPH2Q9BR39 696 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-205ENST00000538545 NUP85Q9BW27 656 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 ARFGAP3Q9NP61 516 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 GJD2Q9UKL4 321 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 ALG6Q9Y672 507 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 NCANO14594 1321 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 TMOD1P28289 359 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 ABCD1P33897 745 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 GPC5P78333 572 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 CFAP221Q4G0U5 840 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 MTERF4Q7Z6M4 381 aaKnown RBP15.13■□□□□ 0.01
ACTN1-205ENST00000538545 SLFN11Q7Z7L1 901 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 TMEM40Q8WWA1 233 aa15.13■□□□□ 0.01
ACTN1-205ENST00000538545 ASS1P00966 412 aaKnown RBP15.12■□□□□ 0.01
ACTN1-205ENST00000538545 SLC10A3P09131 477 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 RRM1P23921 792 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 BRD2P25440 801 aaKnown RBP15.12■□□□□ 0.01
ACTN1-205ENST00000538545 GNA15P30679 374 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 DUOXA2Q1HG44 320 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 BEND6Q5SZJ8 279 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-205ENST00000538545 WDR49Q8IV35 697 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 C1orf127Q8N9H9 656 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 KCNN1Q92952 543 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 C11orf70Q9BRQ4 267 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 RPF1Q9H9Y2 349 aaKnown RBP15.12■□□□□ 0.01
ACTN1-205ENST00000538545 SIX4Q9UIU6 781 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 RAB21Q9UL25 225 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 TNFSF13BQ9Y275 285 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 KIAA0391O15091 583 aaKnown RBP15.12■□□□□ 0.01
ACTN1-205ENST00000538545 THAP12O43422 761 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 TSPAN1O60635 241 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 ITGB3P05106 788 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 ANXA13P27216 316 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 TRPC3Q13507 836 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 SLC10A6Q3KNW5 377 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 GLRA4Q5JXX5 417 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 TRPV1Q8NER1 839 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 APOL6Q9BWW8 343 aa15.12■□□□□ 0.01
ACTN1-205ENST00000538545 EIF2AQ9BY44 585 aaKnown RBP15.12■□□□□ 0.01
ACTN1-205ENST00000538545 PRMT7Q9NVM4 692 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms