RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 MTMR12Q9C0I1 747 aa13.78□□□□□ -0.2
CDK2AP1-204ENST00000538446 TSPY26PQ9H489 355 aa13.78□□□□□ -0.2
CDK2AP1-204ENST00000538446 GOLGA2P5Q9HBQ8 144 aa13.78□□□□□ -0.2
CDK2AP1-204ENST00000538446 DPP3Q9NY33 737 aa13.78□□□□□ -0.2
CDK2AP1-204ENST00000538446 MTUS1Q9ULD2 1270 aa13.78□□□□□ -0.2
CDK2AP1-204ENST00000538446 FAN1Q9Y2M0 1017 aa13.78□□□□□ -0.2
CDK2AP1-204ENST00000538446 PRG3Q9Y2Y8 225 aaPredicted RBP13.78□□□□□ -0.2
CDK2AP1-204ENST00000538446 R3HCC1Q9Y3T6 440 aaKnown RBP13.78□□□□□ -0.2
CDK2AP1-204ENST00000538446 SMTNL1A8MU46 457 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 BECN2A8MW95 431 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 PODXLO00592 558 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 NRP1O14786 923 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 GALTP07902 379 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 LINC00271P0C7V0 271 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 TRIM49P0CI25 452 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 TRIM49CP0CI26 452 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 LRPAP1P30533 357 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 PBX3P40426 434 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 CLCNKBP51801 687 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 GUCY2FP51841 1108 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 MARSP56192 900 aaKnown RBP13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 ERVK-21P61565 698 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 DLG4P78352 724 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 CLDN10P78369 228 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 PTPRJQ12913 1337 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 BIRC3Q13489 604 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 OR5B17Q8NGF7 314 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 C17orf80Q9BSJ5 609 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 C11orf84Q9BUA3 381 aaPredicted RBP13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 COLEC11Q9BWP8 271 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 SPG21Q9NZD8 308 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 ITGA11Q9UKX5 1188 aa13.77□□□□□ -0.21
CDK2AP1-204ENST00000538446 TMEM265A0A087WTH1 108 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 NT5C1B-RDH14C9J2C7 533 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 SOX1O00570 391 aaPredicted RBP13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 PHACTR2O75167 634 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 B3GAT3O94766 335 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 RB1P06400 928 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 KRT19P08727 400 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 GTF2H1P32780 548 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 ZNF445P59923 1031 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 MCCD1P59942 119 aaPredicted RBP13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 UPP1Q16831 310 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 EPC2Q52LR7 807 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 HSP90AA4PQ58FG1 418 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 HABP4Q5JVS0 413 aaKnown RBP13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 C9orf57Q5W0N0 161 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 DCLRE1AQ6PJP8 1040 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 IRF2BP1Q8IU81 584 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 SLC39A11Q8N1S5 342 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 C1orf127Q8N9H9 656 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 FAM200AQ8TCP9 573 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 RABGGTAQ92696 567 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 SLC35C1Q96A29 364 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 TMEM169Q96HH4 297 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 FAM84AQ96KN4 292 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 PAAF1Q9BRP4 392 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 ZNF576Q9H609 170 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 SAMSN1Q9NSI8 373 aaKnown RBP13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 FANCLQ9NW38 375 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 CACNG4Q9UBN1 327 aa13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDK2AP1-204ENST00000538446 KCNJ18B7U540 433 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 C5orf67F2Z3F1 127 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 TMEM189-UBE2V1I3L0A0 370 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 TADA2AO75478 443 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 FGF18O76093 207 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 KIF4AO95239 1232 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 ITGB3P05106 788 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 EEF1GP26641 437 aaKnown RBP13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 POLR2BP30876 1174 aaKnown RBP13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 PNPLA4P41247 253 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 MTIF2P46199 727 aaKnown RBP13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 GCLMP48507 274 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 MXI1P50539 228 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 TPM4P67936 248 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 RBP5P82980 135 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 KRT17Q04695 432 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 TRPC3Q13507 836 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 KCNJ12Q14500 433 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 C1orf220Q5T0J3 134 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 SV2AQ7L0J3 742 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 TRAPPC11Q7Z392 1133 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 SPRED2Q7Z698 418 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 TRIM59Q8IWR1 403 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 DHX40Q8IX18 779 aaKnown RBP13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 KLHL23Q8NBE8 558 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 ANKRD20A12PQ8NF67 263 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 ARNTL2Q8WYA1 636 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 ZNF516Q92618 1163 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 IGSF21Q96ID5 467 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 ZNF560Q96MR9 790 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 MMRN2Q9H8L6 949 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 CERS4Q9HA82 394 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 CBX8Q9HC52 389 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 TMEM8AQ9HCN3 771 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 ADAM28Q9UKQ2 775 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 AGAP1Q9UPQ3 857 aa13.75□□□□□ -0.21
CDK2AP1-204ENST00000538446 NUB1Q9Y5A7 615 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms