RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 AMACRQ9UHK6 382 aa7.09□□□□□ -1.27
USP28-206ENST00000538224 FEZ2Q9UHY8 353 aaPredicted RBP7.09□□□□□ -1.27
USP28-206ENST00000538224 FZD1Q9UP38 647 aa7.09□□□□□ -1.27
USP28-206ENST00000538224 SLC45A1Q9Y2W3 748 aa7.09□□□□□ -1.27
USP28-206ENST00000538224 CEP83Q9Y592 693 aa7.09□□□□□ -1.27
USP28-206ENST00000538224 CNTNAP2Q9UHC6 1331 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 GOLGB1Q14789 3259 aaKnown RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 ESYT3A0FGR9 886 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 IQCA1LA6NCM1 817 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 ZSCAN5CA6NGD5 496 aaPredicted RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 ERICH4A6NGS2 130 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 TMEM110-MUSTN1A8MSY1 372 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 MYO1FO00160 1098 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 ACKR2O00590 384 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 TTI1O43156 1089 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 THAP12O43422 761 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 MSCO60682 206 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 ASS1P00966 412 aaKnown RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 TNNC2P02585 160 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 CYP1A1P04798 512 aaPredicted RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 CALB1P05937 261 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 TMEM191BP0C7N4 346 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 MYZAPP0CAP1 466 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 PHKA2P46019 1235 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 ACOT2P49753 483 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 PEX5P50542 639 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 GUCY2FP51841 1108 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 NOMO3P69849 1222 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 TNFAIP2Q03169 654 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 POU5F1BQ06416 359 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 LAMTOR4Q0VGL1 99 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 SNAPC2Q13487 334 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 NCOA4Q13772 614 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 DUOXA2Q1HG44 320 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 SGSM1Q2NKQ1 1148 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 ZNF484Q5JVG2 852 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 AGBL2Q5U5Z8 902 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 EMC10Q5UCC4 262 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 DUPD1Q68J44 220 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 CRELD2Q6UXH1 353 aaPredicted RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 KDM7AQ6ZMT4 941 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 MON1BQ7L1V2 547 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 APBB1IPQ7Z5R6 666 aaPredicted RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 DNAAF5Q86Y56 855 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 PHF13Q86YI8 300 aaPredicted RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 SLC13A5Q86YT5 568 aaPredicted RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 MCOLN2Q8IZK6 566 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 ABRAQ8N0Z2 381 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 TTC39CQ8N584 583 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 RBBP8NLQ8NC74 664 aaPredicted RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 TSEN2Q8NCE0 465 aaKnown RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 ZNF526Q8TF50 670 aaPredicted RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 PRPF31Q8WWY3 499 aaKnown RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 ALG3Q92685 438 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 SLCO2A1Q92959 643 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 TATDN2Q93075 761 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 ANKRD36BP1Q96IX9 119 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 ATP6V1G3Q96LB4 118 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 SPATA33Q96N06 139 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 ACO2Q99798 780 aaKnown RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 TCHPQ9BT92 498 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 CAPS2Q9BXY5 557 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 NIF3L1Q9GZT8 377 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 FAM107BQ9H098 131 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 STMN4Q9H169 189 aaPredicted RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 VTA1Q9NP79 307 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 PRMT7Q9NVM4 692 aaPredicted RBP7.08□□□□□ -1.28
USP28-206ENST00000538224 ERAP1Q9NZ08 941 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 ANAPC7Q9UJX3 599 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 PCDHB4Q9Y5E5 795 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 MGAMO43451 1857 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 CITO14578 2027 aa7.08□□□□□ -1.28
USP28-206ENST00000538224 PDCD11Q14690 1871 aaKnown RBP7.07□□□□□ -1.28
USP28-206ENST00000538224 KAT6AQ92794 2004 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 EVPLQ92817 2033 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 MAGEB2O15479 319 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 DAPK3O43293 454 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 MED7O43513 233 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 ZEB2O60315 1214 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 GRIN3BO60391 1043 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 SORBS3O60504 671 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 PPFIA2O75334 1257 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 PPFIA4O75335 1185 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 PROSCO94903 275 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 VNN1O95497 513 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 ECEL1O95672 775 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 GAS8O95995 478 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 FAM153BP0C7A2 387 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 ITGA4P13612 1032 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 P4HA1P13674 534 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 NR1D1P20393 614 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 ACO1P21399 889 aaKnown RBP7.07□□□□□ -1.28
USP28-206ENST00000538224 ECHS1P30084 290 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 HSD17B3P37058 310 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 GCLCP48506 637 aaPredicted RBP7.07□□□□□ -1.28
USP28-206ENST00000538224 ZNF132P52740 706 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 GYS2P54840 703 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 CAV1Q03135 178 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 TRPC3Q13507 836 aa7.07□□□□□ -1.28
USP28-206ENST00000538224 LAMC2Q13753 1193 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms