RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 GGT7Q9UJ14 662 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 RRP15Q9Y3B9 282 aaKnown RBP11.8□□□□□ -0.52
LINC00346-201ENST00000538077 TULP4Q9NRJ4 1543 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 IQSEC2Q5JU85 1478 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 SYCE1LA8MT33 242 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 LUC7L3O95232 432 aaKnown RBP11.8□□□□□ -0.52
LINC00346-201ENST00000538077 ATP1A1P05023 1023 aaKnown RBP11.8□□□□□ -0.52
LINC00346-201ENST00000538077 GFAPP14136 432 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 ARHGEF7Q14155 803 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 MORF4L2Q15014 288 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 KYAT1Q16773 422 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 SDE2Q6IQ49 451 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 FMR1NBQ8N0W7 255 aaPredicted RBP11.8□□□□□ -0.52
LINC00346-201ENST00000538077 TGS1Q96RS0 853 aaKnown RBP11.8□□□□□ -0.52
LINC00346-201ENST00000538077 WNT8AQ9H1J5 351 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 METTL5Q9NRN9 209 aaKnown RBP11.8□□□□□ -0.52
LINC00346-201ENST00000538077 PREX1Q8TCU6 1659 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 PYGLP06737 847 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 NR3C2P08235 984 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 TYK2P29597 1187 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 ESRRGP62508 458 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 SNRNP35Q16560 246 aaKnown RBP11.8□□□□□ -0.52
LINC00346-201ENST00000538077 C1orf146Q5VVC0 180 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 NUDCD3Q8IVD9 361 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 TMCO5AQ8N6Q1 288 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 MCF2P10911 925 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 TMED1Q13445 227 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 SNX17Q15036 470 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 SGO1Q5FBB7 561 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 FSCBQ5H9T9 825 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 STKLD1Q8NE28 680 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 SEPT1Q8WYJ6 367 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 MTIF3Q9H2K0 278 aaKnown RBP11.8□□□□□ -0.52
LINC00346-201ENST00000538077 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.8□□□□□ -0.52
LINC00346-201ENST00000538077 FAM47DPA6NHR8 397 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 SUPT3HB4E1H0 165 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 SUPT3HO75486 399 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 VTNP04004 478 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 BRD2P25440 801 aaKnown RBP11.79□□□□□ -0.52
LINC00346-201ENST00000538077 PBLDP30039 288 aaPredicted RBP11.79□□□□□ -0.52
LINC00346-201ENST00000538077 EIF3BP55884 814 aaKnown RBP11.79□□□□□ -0.52
LINC00346-201ENST00000538077 ATP2C1P98194 919 aaPredicted RBP11.79□□□□□ -0.52
LINC00346-201ENST00000538077 DCAF6Q58WW2 860 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 PDXDC1Q6P996 788 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 SLC35G2Q8TBE7 412 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 ADGRB3O60242 1522 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 TTC26A0AVF1 554 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 CENPAP49450 140 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 GJB7Q6PEY0 223 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 NUP93Q8N1F7 819 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 CPA4Q9UI42 421 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 ATP11BQ9Y2G3 1177 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 MIF4GDA9UHW6 222 aaKnown RBP11.79□□□□□ -0.52
LINC00346-201ENST00000538077 RTN2O75298 545 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 LRRC74AQ0VAA2 488 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 P3H1Q32P28 736 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC00346-201ENST00000538077 MOV10L1Q9BXT6 1211 aaKnown RBP11.79□□□□□ -0.52
LINC00346-201ENST00000538077 KDM6AO15550 1401 aaPredicted RBP11.79□□□□□ -0.52
LINC00346-201ENST00000538077 ZC3H13Q5T200 1668 aaKnown RBP11.79□□□□□ -0.52
LINC00346-201ENST00000538077 ENDOD1O94919 500 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 PDGFRAP16234 1089 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 DEUP1Q05D60 604 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 SV2CQ496J9 727 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 XKR3Q5GH77 459 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 FBXO16Q8IX29 292 aaPredicted RBP11.79□□□□□ -0.52
LINC00346-201ENST00000538077 ASAP3Q8TDY4 903 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 C18orf8Q96DM3 657 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 BTBD6Q96KE9 485 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 TSSK1BQ9BXA7 367 aa11.79□□□□□ -0.52
LINC00346-201ENST00000538077 XPO7Q9UIA9 1087 aaKnown RBP11.79□□□□□ -0.52
LINC00346-201ENST00000538077 H0Y626 953 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 NCAM1P13591 858 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 DNAJB2P25686 324 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 RAP1GAPP47736 663 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 RNF180Q86T96 592 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 RBBP8NLQ8NC74 664 aaPredicted RBP11.78□□□□□ -0.52
LINC00346-201ENST00000538077 NAGPAQ9UK23 515 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 TRIM33Q9UPN9 1127 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 HMGB1P1B2RPK0 211 aaPredicted RBP11.78□□□□□ -0.52
LINC00346-201ENST00000538077 STXBP3O00186 592 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 ITGB3P05106 788 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 HMOX2P30519 316 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 CCDC85BQ15834 202 aaPredicted RBP11.78□□□□□ -0.52
LINC00346-201ENST00000538077 ZRANB3Q5FWF4 1079 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 C16orf86Q6ZW13 317 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 IPMKQ8NFU5 416 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 TUBB6Q9BUF5 446 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 TRIM45Q9H8W5 580 aaPredicted RBP11.78□□□□□ -0.52
LINC00346-201ENST00000538077 CD274Q9NZQ7 290 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 FZD1Q9UP38 647 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 LRRC7Q96NW7 1537 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 SEC24DO94855 1032 aaPredicted RBP11.78□□□□□ -0.52
LINC00346-201ENST00000538077 AVPR1AP37288 418 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 AARSP49588 968 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC00346-201ENST00000538077 CUL3Q13618 768 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 GLB1LQ6UWU2 654 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 TRIML2Q8N7C3 387 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 ZNF609O15014 1411 aa11.78□□□□□ -0.52
LINC00346-201ENST00000538077 PFASO15067 1338 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms