RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 CES2O00748 559 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 OGTO15294 1046 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 ACO1P21399 889 aaKnown RBP18.71■□□□□ 0.59
SNX17-210ENST00000537606 MARCKSL1P49006 195 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 ZNF568Q3ZCX4 644 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 GLE1Q53GS7 698 aaKnown RBP18.71■□□□□ 0.59
SNX17-210ENST00000537606 LLGL2Q6P1M3 1020 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 PASD1Q8IV76 773 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 EXOC8Q8IYI6 725 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 ALG3Q92685 438 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 KRT35Q92764 455 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 DDX47Q9H0S4 455 aaKnown RBP18.71■□□□□ 0.59
SNX17-210ENST00000537606 C2orf40Q9H1Z8 148 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 FZD8Q9H461 694 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 GDF3Q9NR23 364 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 CPA4Q9UI42 421 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 SLC45A1Q9Y2W3 748 aa18.71■□□□□ 0.59
SNX17-210ENST00000537606 A0A087WZ62 844 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 LOC102724159A0A0B4J2E5 919 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 KRIT1O00522 736 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 ACKR2O00590 384 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 FGGP02679 453 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 SMPD1P17405 629 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 TFAMQ00059 246 aaKnown RBP18.7■□□□□ 0.58
SNX17-210ENST00000537606 MBTD1Q05BQ5 628 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 MCL1Q07820 350 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 TFDP1Q14186 410 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 PWP2Q15269 919 aaKnown RBP18.7■□□□□ 0.58
SNX17-210ENST00000537606 ACAD10Q6JQN1 1059 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 PPTC7Q8NI37 304 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 NPLOC4Q8TAT6 608 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 MAML3Q96JK9 1138 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 JPH2Q9BR39 696 aaPredicted RBP18.7■□□□□ 0.58
SNX17-210ENST00000537606 FDXACB1Q9BRP7 624 aaPredicted RBP18.7■□□□□ 0.58
SNX17-210ENST00000537606 IFT122Q9HBG6 1241 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 MED4Q9NPJ6 270 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 AKT3Q9Y243 479 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 NR2E1Q9Y466 385 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 CLTAP09496 248 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 GUCY2FP51841 1108 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 EPHB4P54760 987 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 PTENP60484 403 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 MYL6P60660 151 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 CLEC16AQ2KHT3 1053 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 PRAMEF19Q5SWL8 479 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 IFT20Q8IY31 132 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 ZNF564Q8TBZ8 553 aaPredicted RBP18.7■□□□□ 0.58
SNX17-210ENST00000537606 C16orf70Q9BSU1 422 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 FAM204AQ9H8W3 233 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 CPSF3Q9UKF6 684 aaKnown RBP18.7■□□□□ 0.58
SNX17-210ENST00000537606 PCDHB2Q9Y5E7 798 aa18.7■□□□□ 0.58
SNX17-210ENST00000537606 GOLGA6BA6NDN3 693 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 UNCXA6NJT0 531 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 ADCY6O43306 1168 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 COMTP21964 271 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 CST9Q5W186 159 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 MPZL3Q6UWV2 235 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 TSHZ1Q6ZSZ6 1077 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 CYFIP2Q96F07 1278 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 PTPRHQ9HD43 1115 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 CNOT8Q9UFF9 292 aaKnown RBP18.69■□□□□ 0.58
SNX17-210ENST00000537606 TNNC1P63316 161 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 GRB14Q14449 540 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 WDR49Q8IV35 697 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 ABRAQ8N0Z2 381 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 RASGEF1CQ8N431 466 aa18.69■□□□□ 0.58
SNX17-210ENST00000537606 PARK7Q99497 189 aaKnown RBP18.69■□□□□ 0.58
SNX17-210ENST00000537606 H3BRB1 525 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 CD58P19256 250 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 PROZP22891 400 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 FKBP1BP68106 108 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 ZNF394Q53GI3 561 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 ZNF484Q5JVG2 852 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 PLEKHH3Q7Z736 793 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 DDX42Q86XP3 938 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNX17-210ENST00000537606 EFCAB13Q8IY85 973 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 RUBCNQ92622 972 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 CPB2Q96IY4 423 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 TRIM7Q9C029 511 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 TUT1Q9H6E5 874 aaKnown RBP18.68■□□□□ 0.58
SNX17-210ENST00000537606 DNAH12Q6ZR08 3092 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 RBM47A0AV96 593 aaKnown RBP18.68■□□□□ 0.58
SNX17-210ENST00000537606 SART1O43290 800 aaKnown RBP18.68■□□□□ 0.58
SNX17-210ENST00000537606 CYP1A2P05177 515 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 CXCL8P10145 99 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 UNGP13051 313 aaPredicted RBP18.68■□□□□ 0.58
SNX17-210ENST00000537606 HADHBP55084 474 aaKnown RBP18.68■□□□□ 0.58
SNX17-210ENST00000537606 ACVR2BQ13705 512 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 RBBP8NLQ8NC74 664 aaPredicted RBP18.68■□□□□ 0.58
SNX17-210ENST00000537606 EXOC4Q96A65 974 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 RNPC3Q96LT9 517 aaKnown RBP18.68■□□□□ 0.58
SNX17-210ENST00000537606 TINF2Q9BSI4 451 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 CDT1Q9H211 546 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 GTF3C4Q9UKN8 822 aa18.68■□□□□ 0.58
SNX17-210ENST00000537606 GPR25O00155 361 aa18.67■□□□□ 0.58
SNX17-210ENST00000537606 TNFRSF8P28908 595 aa18.67■□□□□ 0.58
SNX17-210ENST00000537606 GNA15P30679 374 aa18.67■□□□□ 0.58
SNX17-210ENST00000537606 DUOXA2Q1HG44 320 aa18.67■□□□□ 0.58
SNX17-210ENST00000537606 EMBQ6PCB8 327 aa18.67■□□□□ 0.58
SNX17-210ENST00000537606 FAM81BQ96LP2 452 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms