RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 CEP57Q86XR8 500 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 SYCP3Q8IZU3 236 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 FAM212AQ96EL1 285 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 DDX27Q96GQ7 796 aaKnown RBP18.84■□□□□ 0.61
GPN3-202ENST00000537466 RXFP1Q9HBX9 757 aa18.84■□□□□ 0.61
GPN3-202ENST00000537466 TTC28Q96AY4 2481 aa18.83■□□□□ 0.6
GPN3-202ENST00000537466 I3L4J1 428 aa18.83■□□□□ 0.6
GPN3-202ENST00000537466 KLRC4O43908 158 aa18.83■□□□□ 0.6
GPN3-202ENST00000537466 RPL17P18621 184 aaKnown RBP18.83■□□□□ 0.6
GPN3-202ENST00000537466 SMAD2Q15796 467 aaKnown RBP18.83■□□□□ 0.6
GPN3-202ENST00000537466 TTPALQ9BTX7 342 aa18.83■□□□□ 0.6
GPN3-202ENST00000537466 S1PR5Q9H228 398 aa18.83■□□□□ 0.6
GPN3-202ENST00000537466 TMEM206Q9H813 350 aa18.83■□□□□ 0.6
GPN3-202ENST00000537466 USP25Q9UHP3 1055 aa18.83■□□□□ 0.6
GPN3-202ENST00000537466 SCN1AP35498 2009 aa18.83■□□□□ 0.6
GPN3-202ENST00000537466 PVALEFA0A1B0GWK0 134 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 GUCY2FP51841 1108 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 ELAVL2Q12926 359 aaKnown RBP18.82■□□□□ 0.6
GPN3-202ENST00000537466 POSTNQ15063 836 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 JADE1Q6IE81 842 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 KANK3Q6NY19 840 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 STXBP4Q6ZWJ1 553 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 PPFIBP1Q86W92 1011 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 GLYCTKQ8IVS8 523 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 FEZF2Q8TBJ5 459 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 ZNF507Q8TCN5 953 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 SAAL1Q96ER3 474 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 CBWD1Q9BRT8 395 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 SLC39A2Q9NP94 309 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 CDH22Q9UJ99 828 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 USP15Q9Y4E8 981 aaPredicted RBP18.82■□□□□ 0.6
GPN3-202ENST00000537466 CUL9Q8IWT3 2517 aa18.82■□□□□ 0.6
GPN3-202ENST00000537466 NCOR1O75376 2440 aa18.81■□□□□ 0.6
GPN3-202ENST00000537466 EIF3DO15371 548 aaKnown RBP eCLIP18.81■□□□□ 0.6
GPN3-202ENST00000537466 ADH1AP07327 375 aa18.81■□□□□ 0.6
GPN3-202ENST00000537466 NFICP08651 508 aa18.81■□□□□ 0.6
GPN3-202ENST00000537466 PRR29P0C7W0 189 aa18.81■□□□□ 0.6
GPN3-202ENST00000537466 GARTP22102 1010 aa18.81■□□□□ 0.6
GPN3-202ENST00000537466 FGFR3P22607 806 aa18.81■□□□□ 0.6
GPN3-202ENST00000537466 RPL9P32969 192 aaKnown RBP18.81■□□□□ 0.6
GPN3-202ENST00000537466 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.81■□□□□ 0.6
GPN3-202ENST00000537466 DENND4AQ7Z401 1863 aa18.81■□□□□ 0.6
GPN3-202ENST00000537466 GPR65Q8IYL9 337 aa18.81■□□□□ 0.6
GPN3-202ENST00000537466 C12orf76Q8N812 135 aaPredicted RBP18.81■□□□□ 0.6
GPN3-202ENST00000537466 LNX1Q8TBB1 728 aaPredicted RBP18.81■□□□□ 0.6
GPN3-202ENST00000537466 FAM213AQ9BRX8 229 aa18.81■□□□□ 0.6
GPN3-202ENST00000537466 PCIF1Q9H4Z3 704 aa18.81■□□□□ 0.6
GPN3-202ENST00000537466 CD320Q9NPF0 282 aa18.81■□□□□ 0.6
GPN3-202ENST00000537466 FNIP2Q9P278 1114 aa18.81■□□□□ 0.6
GPN3-202ENST00000537466 UBQLN1Q9UMX0 589 aaKnown RBP18.81■□□□□ 0.6
GPN3-202ENST00000537466 FAM50BQ9Y247 325 aa18.81■□□□□ 0.6
GPN3-202ENST00000537466 GOLGA8IPA6NC78 632 aa18.8■□□□□ 0.6
GPN3-202ENST00000537466 GOLGA8JA6NMD2 632 aa18.8■□□□□ 0.6
GPN3-202ENST00000537466 HOXB8P17481 243 aaPredicted RBP18.8■□□□□ 0.6
GPN3-202ENST00000537466 TKTP29401 623 aaKnown RBP18.8■□□□□ 0.6
GPN3-202ENST00000537466 LRPAP1P30533 357 aa18.8■□□□□ 0.6
GPN3-202ENST00000537466 WNT7BP56706 349 aa18.8■□□□□ 0.6
GPN3-202ENST00000537466 PSMD5Q16401 504 aa18.8■□□□□ 0.6
GPN3-202ENST00000537466 CD302Q8IX05 232 aa18.8■□□□□ 0.6
GPN3-202ENST00000537466 SCFD1Q8WVM8 642 aa18.8■□□□□ 0.6
GPN3-202ENST00000537466 PIK3R5Q8WYR1 880 aa18.8■□□□□ 0.6
GPN3-202ENST00000537466 SUSD6Q92537 303 aa18.8■□□□□ 0.6
GPN3-202ENST00000537466 FBXL18Q96ME1 805 aa18.8■□□□□ 0.6
GPN3-202ENST00000537466 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.8■□□□□ 0.6
GPN3-202ENST00000537466 TSC2P49815 1807 aa18.8■□□□□ 0.6
GPN3-202ENST00000537466 ZNF202O95125 648 aa18.79■□□□□ 0.6
GPN3-202ENST00000537466 CYP3A5P20815 502 aa18.79■□□□□ 0.6
GPN3-202ENST00000537466 KMT5BQ4FZB7 885 aa18.79■□□□□ 0.6
GPN3-202ENST00000537466 RARS2Q5T160 578 aaKnown RBP18.79■□□□□ 0.6
GPN3-202ENST00000537466 ARMCX5Q6P1M9 558 aa18.79■□□□□ 0.6
GPN3-202ENST00000537466 KRBA2Q6ZNG9 492 aa18.79■□□□□ 0.6
GPN3-202ENST00000537466 PALB2Q86YC2 1186 aa18.79■□□□□ 0.6
GPN3-202ENST00000537466 NELFCDQ8IXH7 590 aa18.79■□□□□ 0.6
GPN3-202ENST00000537466 CLSTN3Q9BQT9 956 aa18.79■□□□□ 0.6
GPN3-202ENST00000537466 ASB7Q9H672 318 aa18.79■□□□□ 0.6
GPN3-202ENST00000537466 DZANK1Q9NVP4 752 aa18.79■□□□□ 0.6
GPN3-202ENST00000537466 NUB1Q9Y5A7 615 aa18.79■□□□□ 0.6
GPN3-202ENST00000537466 BDP1A6H8Y1 2624 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 TNFRSF10AO00220 468 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 PPEF2O14830 753 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 ADAM12O43184 909 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 TGFB1I1O43294 461 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 TRAPPC3O43617 180 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 GLUD1P00367 558 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 SPATA31D3P0C874 917 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 ZP2Q05996 745 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 TMEM132DQ14C87 1099 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 SPATA1Q5VX52 437 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 SPATA31D4Q6ZUB0 917 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 EFCAB13Q8IY85 973 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 TSPAN18Q96SJ8 248 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 MAN1C1Q9NR34 630 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 CIZ1Q9ULV3 898 aaPredicted RBP18.78■□□□□ 0.6
GPN3-202ENST00000537466 UBE4BO95155 1302 aa18.78■□□□□ 0.6
GPN3-202ENST00000537466 TGM5O43548 720 aa18.77■□□□□ 0.6
GPN3-202ENST00000537466 XPOTO43592 962 aaKnown RBP18.77■□□□□ 0.6
GPN3-202ENST00000537466 LDHAP00338 332 aaKnown RBP18.77■□□□□ 0.6
GPN3-202ENST00000537466 WEE2P0C1S8 567 aa18.77■□□□□ 0.6
GPN3-202ENST00000537466 MCM4P33991 863 aa18.77■□□□□ 0.6
GPN3-202ENST00000537466 POU5F1Q01860 360 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms