RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 FXR1P51114 621 aaKnown RBP eCLIP4.31□□□□□ -1.72
SEC23A-202ENST00000537403 EIF3BP55884 814 aaKnown RBP4.31□□□□□ -1.72
SEC23A-202ENST00000537403 ARL4CP56559 192 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 NLRP11P59045 1033 aaKnown RBP4.31□□□□□ -1.72
SEC23A-202ENST00000537403 ACTR2P61160 394 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 NME3Q13232 169 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 CUL1Q13616 776 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 LAMC2Q13753 1193 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 RNF219Q5W0B1 726 aaPredicted RBP4.31□□□□□ -1.72
SEC23A-202ENST00000537403 BTBD8Q5XKL5 378 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 SPOPLQ6IQ16 392 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 NFRKBQ6P4R8 1299 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 C1orf228Q6PIY5 440 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 FAM83AQ86UY5 434 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 TRIM42Q8IWZ5 723 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 KCTD17Q8N5Z5 321 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 GANCQ8TET4 914 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 KCNB2Q92953 911 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 GPRASP2Q96D09 838 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 GLT1D1Q96MS3 346 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 TTC25Q96NG3 672 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 OSBPL9Q96SU4 736 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 TRIM56Q9BRZ2 755 aaKnown RBP4.31□□□□□ -1.72
SEC23A-202ENST00000537403 STK33Q9BYT3 514 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 EHD4Q9H223 541 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 SAYSD1Q9NPB0 183 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 AGPAT5Q9NUQ2 364 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 PRMT7Q9NVM4 692 aaPredicted RBP4.31□□□□□ -1.72
SEC23A-202ENST00000537403 APEX2Q9UBZ4 518 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 PPP1R9AQ9ULJ8 1098 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 BRCA2P51587 3418 aa4.31□□□□□ -1.72
SEC23A-202ENST00000537403 WDR91A4D1P6 747 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 SLC16A3O15427 465 aaKnown RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 SLC26A4O43511 780 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 UPP2O95045 317 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 PDGFRBP09619 1106 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 KRT3P12035 628 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 NFKBIAP25963 317 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 CCT5P48643 541 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 CDH6P55285 790 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 IRX4P78413 519 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 NNTQ13423 1086 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 MAP7Q14244 749 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 TMEM132DQ14C87 1099 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 VEPH1Q14D04 833 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 SGSM1Q2NKQ1 1148 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 MMEL1Q495T6 779 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 GLE1Q53GS7 698 aaKnown RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 EFHC2Q5JST6 749 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 CST9Q5W186 159 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 TRIM59Q8IWR1 403 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 SYT2Q8N9I0 419 aaPredicted RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 CFAP61Q8NHU2 1237 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 CFAP36Q96G28 342 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 GMCL1Q96IK5 515 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 PDLIM2Q96JY6 352 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 IRX2Q9BZI1 471 aaPredicted RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 CACYBPQ9HB71 228 aaKnown RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 PIDD1Q9HB75 910 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 TLL2Q9Y6L7 1015 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 KBTBD13C9JR72 458 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 WNT10BO00744 389 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 CLGNO14967 610 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 SART1O43290 800 aaKnown RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 NOL3O60936 208 aaKnown RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 TADA2AO75478 443 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 KRT37O76014 449 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 ARP10275 920 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 TCF7P36402 384 aaPredicted RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 KPNA2P52292 529 aaKnown RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 GTF2A1P52655 376 aaPredicted RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 GTF2A2P52657 109 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 GALCP54803 685 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 COG7P83436 770 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 SLC18A3Q16572 532 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 DGKDQ16760 1214 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 TSNAXIP1Q2TAA8 658 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 ATF7IP2Q5U623 682 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 ALS2CLQ60I27 953 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 MAP1SQ66K74 1059 aaPredicted RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 HEATR6Q6AI08 1181 aaKnown RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 JADE1Q6IE81 842 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 FAM117BQ6P1L5 589 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 NDUFAF2Q8N183 169 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 ELMOD1Q8N336 334 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 DAGLBQ8NCG7 672 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 RDM1Q8NG50 284 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 SLC30A5Q8TAD4 765 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 PGBD4Q96DM1 585 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 ZFRQ96KR1 1074 aaKnown RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 CALR3Q96L12 384 aaKnown RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 POLR3CQ9BUI4 534 aaPredicted RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 VCXQ9H320 206 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 GBA2Q9HCG7 927 aaPredicted RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 PARVAQ9NVD7 372 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 MAP3K20Q9NYL2 800 aaKnown RBP4.3□□□□□ -1.72
SEC23A-202ENST00000537403 HDAC6Q9UBN7 1215 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 LCMT1Q9UIC8 334 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 HPCAL4Q9UM19 191 aa4.3□□□□□ -1.72
SEC23A-202ENST00000537403 CAPN7Q9Y6W3 813 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms