RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 ARHGEF37A1IGU5 675 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 TMEM150BA6NC51 233 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 ANTXRLA6NF34 631 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 MEIS1O00470 390 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 NR1I2O75469 434 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 SEC24AO95486 1093 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 GP1BBP13224 206 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 ITPKAP23677 461 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 U2AF2P26368 475 aaKnown RBP eCLIP10.65□□□□□ -0.79e-9■■■□□ 15
CPSF7-217ENST00000537162 ATXN3P54252 364 aaPredicted RBP10.65□□□□□ -0.7
CPSF7-217ENST00000537162 HSP90AA2PQ14568 343 aaPredicted RBP10.65□□□□□ -0.7
CPSF7-217ENST00000537162 UGCGQ16739 394 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 USP39Q53GS9 565 aaKnown RBP10.65□□□□□ -0.7
CPSF7-217ENST00000537162 STXBP5Q5T5C0 1151 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 PDZD4Q76G19 769 aaPredicted RBP10.65□□□□□ -0.7
CPSF7-217ENST00000537162 RHPN2Q8IUC4 686 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 NAXDQ8IW45 347 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 RPLP0P6Q8NHW5 317 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 RLN3Q8WXF3 142 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 EZH1Q92800 747 aaPredicted RBP10.65□□□□□ -0.7
CPSF7-217ENST00000537162 FNBP1Q96RU3 617 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 IFT122Q9HBG6 1241 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 HELLSQ9NRZ9 838 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 STK24Q9Y6E0 443 aa10.65□□□□□ -0.7
CPSF7-217ENST00000537162 NUP210Q8TEM1 1887 aaPredicted RBP10.64□□□□□ -0.71
CPSF7-217ENST00000537162 OTOL1A6NHN0 477 aaPredicted RBP10.64□□□□□ -0.71
CPSF7-217ENST00000537162 SPDYE3A6NKU9 549 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 ERVH48-1M5A8F1 160 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 ZNF197O14709 1029 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 TNFRSF10BO14763 440 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 ANP32CO43423 234 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 CBFA2T3O75081 653 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 GJB3O75712 270 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 LRG1P02750 347 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 OATP04181 439 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 MYL4P12829 197 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 C6P13671 934 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 CEP55Q53EZ4 464 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 CYB5R4Q7L1T6 521 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 SYT13Q7L8C5 426 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 SHKBP1Q8TBC3 707 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 NLRP4Q96MN2 994 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 CEP89Q96ST8 783 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 CAPN10Q9HC96 672 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 ZBTB40Q9NUA8 1239 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 DNAAF2Q9NVR5 837 aaKnown RBP10.64□□□□□ -0.71
CPSF7-217ENST00000537162 PILRBQ9UKJ0 227 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 SLC6A14Q9UN76 642 aa10.64□□□□□ -0.71
CPSF7-217ENST00000537162 CASTOR2A6NHX0 329 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 ZNF213O14771 459 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 MAFO75444 373 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-217ENST00000537162 ATXN1LP0C7T5 689 aaKnown RBP10.63□□□□□ -0.71
CPSF7-217ENST00000537162 CXADRP78310 365 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 PRKCEQ02156 737 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 GRSF1Q12849 480 aaKnown RBP eCLIP10.63□□□□□ -0.71
CPSF7-217ENST00000537162 TARBP2Q15633 366 aaKnown RBP10.63□□□□□ -0.71
CPSF7-217ENST00000537162 MCMDC2Q4G0Z9 681 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 PEAR1Q5VY43 1037 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-217ENST00000537162 LRRC69Q6ZNQ3 347 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 PRICKLE2Q7Z3G6 844 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 KRT25Q7Z3Z0 450 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 GLRX5Q86SX6 157 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 TMC8Q8IU68 726 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 UBAC1Q9BSL1 405 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 UBN1Q9NPG3 1134 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 KLK14Q9P0G3 267 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 KIAA1522Q9P206 1035 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-217ENST00000537162 CEP72Q9P209 647 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 MTRRQ9UBK8 725 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 SEPT9Q9UHD8 586 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-217ENST00000537162 ARID2Q68CP9 1835 aa10.63□□□□□ -0.71
CPSF7-217ENST00000537162 ENO4A6NNW6 628 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 PLK4O00444 970 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 TRDMT1O14717 391 aaKnown RBP10.62□□□□□ -0.71
CPSF7-217ENST00000537162 DKK1O94907 266 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 AKAP5P24588 427 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 GFPT1Q06210 699 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-217ENST00000537162 SPIRE1Q08AE8 756 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 ARHGAP29Q52LW3 1261 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 ANO7Q6IWH7 933 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 RTL10Q7L3V2 364 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 LPCAT2Q7L5N7 544 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 C11orf74Q86VG3 221 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 ZNF410Q86VK4 478 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 RASSF3Q86WH2 238 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 ARID3BQ8IVW6 561 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-217ENST00000537162 DEFB119Q8N690 84 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 PDCD7Q8N8D1 485 aaKnown RBP10.62□□□□□ -0.71
CPSF7-217ENST00000537162 MDGA1Q8NFP4 955 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 INO80BQ9C086 356 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-217ENST00000537162 CXCL16Q9H2A7 254 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 NXF3Q9H4D5 531 aaKnown RBP10.62□□□□□ -0.71
CPSF7-217ENST00000537162 SLITRK6Q9H5Y7 841 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 SUCLA2Q9P2R7 463 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-217ENST00000537162 PCOLCE2Q9UKZ9 415 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 GOLGA4Q13439 2230 aaKnown RBP10.62□□□□□ -0.71
CPSF7-217ENST00000537162 GON4LQ3T8J9 2241 aa10.62□□□□□ -0.71
CPSF7-217ENST00000537162 IGKV6-21A0A0C4DH24 114 aa10.61□□□□□ -0.71
CPSF7-217ENST00000537162 hCG_1642624A0A1W2PR95 340 aa10.61□□□□□ -0.71
CPSF7-217ENST00000537162 FAM205CA6NFA0 338 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms