RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 IZUMO3Q5VZ72 239 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 PPP1R2P3Q6NXS1 205 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 LRRC74BQ6ZQY2 392 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 TMEM126BQ8IUX1 230 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 DCLK2Q8N568 766 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 AGAP3Q96P47 875 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 EFHD1Q9BUP0 239 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 PHF20Q9BVI0 1012 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 METTL5Q9NRN9 209 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 C2CD2LO14523 706 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 HSPA4LO95757 839 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 PRKCIP41743 596 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 HADHQ16836 314 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 C1QTNF12Q5T7M4 302 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 FAM102BQ5T8I3 360 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 FAM91A1Q658Y4 838 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 OR52E8Q6IFG1 317 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 DDX28Q9NUL7 540 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 ARHGAP20Q9P2F6 1191 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 SATB2Q9UPW6 733 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 MTO1Q9Y2Z2 717 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 KRT3P12035 628 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 GARSP41250 739 aaKnown RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 GYG1P46976 350 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 TOB1P50616 345 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 SNX16P57768 344 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 RPS6KA2Q15349 733 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 EDRF1Q3B7T1 1238 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 ZNF746Q6NUN9 644 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 TMEM110Q86TL2 294 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 ANKMY2Q8IV38 441 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 FAM178BQ8IXR5 827 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 GALNT4Q8N4A0 578 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 KLF6Q99612 283 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 NYXQ9GZU5 481 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 PSTPIP2Q9H939 334 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 WHRNQ9P202 907 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 LGALS13Q9UHV8 139 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 BCL9O00512 1426 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 POTEMA6NI47 508 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 GRIN3BO60391 1043 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 KLRC1P26715 233 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 TTKP33981 857 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 NUP107P57740 925 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 LAMA4Q16363 1823 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 KCTD21Q4G0X4 260 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 RARS2Q5T160 578 aaKnown RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 OLFML1Q6UWY5 402 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 IGDCC4Q8TDY8 1250 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 DEPDC1BQ8WUY9 529 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 RFFLQ8WZ73 363 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 DDX18Q9NVP1 670 aaKnown RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 ZNF229Q9UJW7 825 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 PHTF1Q9UMS5 762 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 ZNF510Q9Y2H8 683 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 GTPBP10A4D1E9 387 aaKnown RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 KRT75O95678 551 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 ITIH2P19823 946 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 PIK3CAP42336 1068 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 MCL1Q07820 350 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 KCNMA1Q12791 1236 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 KCNH2Q12809 1159 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 KYNUQ16719 465 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 LRRC47Q8N1G4 583 aaKnown RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 CDKL2Q92772 493 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 CASP10Q92851 521 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 FAM136AQ96C01 138 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 C9orf72Q96LT7 481 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 CNBD2Q96M20 576 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 THTPAQ9BU02 230 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 KRT82Q9NSB4 513 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 MRGBPQ9NV56 204 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 MARCOQ9UEW3 520 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 MAGED2Q9UNF1 606 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 MAGEC1O60732 1142 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 PEX11AO75192 247 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 KRT19P08727 400 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 KRT16P08779 473 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 PLA2G4BP0C869 781 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 ZNF12P17014 697 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 SLC12A2P55011 1212 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 CDK18Q07002 472 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 DNAJC3Q13217 504 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 KRT72Q14CN4 511 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 CNGA3Q16281 694 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 QPCTQ16769 361 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 RINLQ6ZS11 566 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 FAM13CQ8NE31 585 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 MCUQ8NE86 351 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 RAD54LQ92698 747 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 EYA3Q99504 573 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 PCYOX1Q9UHG3 505 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 MYO5AQ9Y4I1 1855 aaKnown RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 E9PMD0 336 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 LSM1O15116 133 aaKnown RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 PRAMEP78395 509 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 COASYQ13057 564 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 ODR4Q5SWX8 454 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 MFSD4BQ5TF39 518 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 WDR75Q8IWA0 830 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms