RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ATAT1Q5SQI0 421 aa15.54■□□□□ 0.08
UBE3B-206ENST00000536398 L1TD1Q5T7N2 865 aaKnown RBP15.54■□□□□ 0.08
UBE3B-206ENST00000536398 RESP18Q5W5W9 173 aa15.54■□□□□ 0.08
UBE3B-206ENST00000536398 ATL3Q6DD88 541 aa15.54■□□□□ 0.08
UBE3B-206ENST00000536398 ADALQ6DHV7 355 aa15.54■□□□□ 0.08
UBE3B-206ENST00000536398 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.54■□□□□ 0.08
UBE3B-206ENST00000536398 GPR149Q86SP6 731 aa15.54■□□□□ 0.08
UBE3B-206ENST00000536398 GPR65Q8IYL9 337 aa15.54■□□□□ 0.08
UBE3B-206ENST00000536398 IQUBQ8NA54 791 aa15.54■□□□□ 0.08
UBE3B-206ENST00000536398 KIF12Q96FN5 646 aa15.54■□□□□ 0.08
UBE3B-206ENST00000536398 RPF1Q9H9Y2 349 aaKnown RBP15.54■□□□□ 0.08
UBE3B-206ENST00000536398 SEL1LQ9UBV2 794 aa15.54■□□□□ 0.08
UBE3B-206ENST00000536398 CPSF3Q9UKF6 684 aaKnown RBP15.54■□□□□ 0.08
UBE3B-206ENST00000536398 STYXL1Q9Y6J8 313 aa15.54■□□□□ 0.08
UBE3B-206ENST00000536398 PLXNA3P51805 1871 aa15.54■□□□□ 0.08
UBE3B-206ENST00000536398 DCXO43602 365 aa15.53■□□□□ 0.08
UBE3B-206ENST00000536398 ADRB2P07550 413 aa15.53■□□□□ 0.08
UBE3B-206ENST00000536398 RPL9P32969 192 aaKnown RBP15.53■□□□□ 0.08
UBE3B-206ENST00000536398 MTHFRP42898 656 aa15.53■□□□□ 0.08
UBE3B-206ENST00000536398 JADE1Q6IE81 842 aa15.53■□□□□ 0.08
UBE3B-206ENST00000536398 CRELD2Q6UXH1 353 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-206ENST00000536398 GRAMD1CQ8IYS0 662 aa15.53■□□□□ 0.08
UBE3B-206ENST00000536398 LEO1Q8WVC0 666 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-206ENST00000536398 ZNF707Q96C28 371 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-206ENST00000536398 RIPOR3Q96MK2 946 aa15.53■□□□□ 0.08
UBE3B-206ENST00000536398 ACCSQ96QU6 501 aa15.53■□□□□ 0.08
UBE3B-206ENST00000536398 TRIM9Q9C026 710 aa15.53■□□□□ 0.08
UBE3B-206ENST00000536398 BLZF1Q9H2G9 400 aa15.53■□□□□ 0.08
UBE3B-206ENST00000536398 TNMDQ9H2S6 317 aa15.53■□□□□ 0.08
UBE3B-206ENST00000536398 OLFML3Q9NRN5 406 aa15.53■□□□□ 0.08
UBE3B-206ENST00000536398 AGO2Q9UKV8 859 aaKnown RBP15.53■□□□□ 0.08
UBE3B-206ENST00000536398 VWA8A3KMH1 1905 aa15.53■□□□□ 0.08
UBE3B-206ENST00000536398 CITO14578 2027 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 C2CD4DB7Z1M9 353 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 PPEF2O14830 753 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 NFICP08651 508 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 ABCD1P33897 745 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 CREMQ03060 361 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 PPP2R3AQ06190 1150 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 SLFN12LQ6IEE8 588 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 CCDC65Q8IXS2 484 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 KREMEN2Q8NCW0 462 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 POMGNT1Q8WZA1 660 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 HVCN1Q96D96 273 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 NECTIN4Q96NY8 510 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 C7orf25Q9BPX7 421 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 CUEDC2Q9H467 287 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 FAM13BQ9NYF5 915 aa15.52■□□□□ 0.08
UBE3B-206ENST00000536398 A0A1B0GVL5 298 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 TRAPPC3O43617 180 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 ALADP13716 330 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 LRPAP1P30533 357 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 OR1D2P34982 312 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 HOXD13P35453 343 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 WNT7BP56706 349 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 ASIC1P78348 528 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 KYAT1Q16773 422 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 VARS2Q5ST30 1063 aaKnown RBP15.51■□□□□ 0.07
UBE3B-206ENST00000536398 SYCP3Q8IZU3 236 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 CMASQ8NFW8 434 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-206ENST00000536398 SAAL1Q96ER3 474 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 SPATA32Q96LK8 384 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 CBWD1Q9BRT8 395 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 LRFN3Q9BTN0 628 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 C1QTNF1Q9BXJ1 281 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 MTRRQ9UBK8 725 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 SERTAD1Q9UHV2 236 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 RAPGEFL1Q9UHV5 662 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 FBXW11Q9UKB1 542 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 KCNH3Q9ULD8 1083 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 UBQLN1Q9UMX0 589 aaKnown RBP15.51■□□□□ 0.07
UBE3B-206ENST00000536398 NUB1Q9Y5A7 615 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 PCDHB13Q9Y5F0 798 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 CDY1Q9Y6F8 540 aa15.51■□□□□ 0.07
UBE3B-206ENST00000536398 GOLGA8IPA6NC78 632 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 GOLGA8JA6NMD2 632 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 TULP1O00294 542 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-206ENST00000536398 MCM4P33991 863 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 AFMP43652 599 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 AMPD3Q01432 767 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 CUL4BQ13620 913 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 RAB33AQ14088 237 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 SPATA1Q5VX52 437 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 CNNM4Q6P4Q7 775 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 C15orf39Q6ZRI6 1047 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 FAM84AQ96KN4 292 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 SUSD3Q96L08 255 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 FAM213AQ9BRX8 229 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 LRRC27Q9C0I9 530 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 PLEKHA4Q9H4M7 779 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 PCIF1Q9H4Z3 704 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 EXOC7Q9UPT5 735 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 TIMM13Q9Y5L4 95 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-206ENST00000536398 BACE2Q9Y5Z0 518 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 TRIOO75962 3097 aa15.5■□□□□ 0.07
UBE3B-206ENST00000536398 SPTLC1O15269 473 aa15.49■□□□□ 0.07
UBE3B-206ENST00000536398 ACTN4O43707 911 aaKnown RBP15.49■□□□□ 0.07
UBE3B-206ENST00000536398 TBC1D4O60343 1298 aa15.49■□□□□ 0.07
UBE3B-206ENST00000536398 GPR37L1O60883 481 aa15.49■□□□□ 0.07
UBE3B-206ENST00000536398 ZMYND10O75800 440 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms