RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 ST13P5Q8NFI4 369 aaPredicted RBP15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 CCDC39Q9UFE4 941 aa15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 MTMR6Q9Y217 621 aa15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 MTCL1Q9Y4B5 1905 aaKnown RBP15.58■□□□□ 0.09
RTN3P1-201ENST00000536295 HNRNPA1P09651 372 aaKnown RBP eCLIP15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 FSHRP23945 695 aa15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 AVPR2P30518 371 aa15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 RPL9P32969 192 aaKnown RBP15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 MCM4P33991 863 aa15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 NHLH1Q02575 133 aa15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 VARS2Q5ST30 1063 aaKnown RBP15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 ZBTB41Q5SVQ8 909 aa15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 DYMQ7RTS9 669 aa15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 KRI1Q8N9T8 703 aaKnown RBP15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 KIF12Q96FN5 646 aa15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 MFSD1Q9H3U5 465 aa15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 EPS15L1Q9UBC2 864 aa15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 SRPRBQ9Y5M8 271 aaKnown RBP15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 BACE2Q9Y5Z0 518 aa15.58■□□□□ 0.08
RTN3P1-201ENST00000536295 ZNF318Q5VUA4 2279 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 MUC6Q6W4X9 2439 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 CITO14578 2027 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 STX6O43752 255 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 NARSO43776 548 aaKnown RBP15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 XYLBO75191 536 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 PAPLNO95428 1278 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 TXLNAP40222 546 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 PPP2R3AQ06190 1150 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 ZC2HC1CQ53FD0 456 aaPredicted RBP15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 RRAGBQ5VZM2 374 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 FAM212AQ96EL1 285 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 USP28Q96RU2 1077 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 FIZ1Q96SL8 496 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 MSTO1Q9BUK6 570 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 PLEKHA5Q9HAU0 1116 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 IGSF9Q9P2J2 1179 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 FBXL21Q9UKT6 434 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 DUSP12Q9UNI6 340 aa15.57■□□□□ 0.08
RTN3P1-201ENST00000536295 TTC26A0AVF1 554 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 LACTBL1A8MY62 500 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 SYN3O14994 580 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 OGTO15294 1046 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 PIGRP01833 764 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 LAMP2P13473 410 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 SCP2P22307 547 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 HOXA9P31269 272 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 HOXD11P31277 338 aaPredicted RBP15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 GUCY2FP51841 1108 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 ROR1Q01973 937 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 SLC39A4Q6P5W5 647 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 ALYREFQ86V81 257 aaKnown RBP15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 SFR1Q86XK3 245 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 PANK2Q9BZ23 570 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 RPF1Q9H9Y2 349 aaKnown RBP15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 HCFC1R1Q9NWW0 138 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 STK17AQ9UEE5 414 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 KMT2EQ8IZD2 1858 aa15.56■□□□□ 0.08
RTN3P1-201ENST00000536295 A0A0B4J269 797 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 TISP43B9A030 160 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 ANKRD63C9JTQ0 380 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 H7C4K7 107 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 CFHP08603 1231 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 ELF1P32519 619 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 GTF2BQ00403 316 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 ENOX2Q16206 610 aaKnown RBP15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 KYAT1Q16773 422 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 UVSSAQ2YD98 709 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 CTXN3Q4LDR2 81 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 FOXD4L5Q5VV16 416 aaPredicted RBP15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 SV2BQ7L1I2 683 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 MAP4K3Q8IVH8 894 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 SLC44A3Q8N4M1 653 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 FLCNQ8NFG4 579 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 FOXD4L4Q8WXT5 416 aaPredicted RBP15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 DDX12PQ92771 950 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 KCNN1Q92952 543 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 SUSD3Q96L08 255 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 ZSCAN16Q9H4T2 348 aaPredicted RBP15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 TBC1D7Q9P0N9 293 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 FBXL5Q9UKA1 691 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 UBQLN1Q9UMX0 589 aaKnown RBP15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 WDFY4Q6ZS81 3184 aa15.55■□□□□ 0.08
RTN3P1-201ENST00000536295 WDR27A2RRH5 827 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 MYMKA6NI61 221 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 TULP1O00294 542 aaPredicted RBP15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 PRRG1O14668 218 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 FAM189A1O60320 539 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 STAT6P42226 847 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 ACOT2P49753 483 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 PTPN5P54829 565 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 TCF15Q12870 199 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 SLC39A14Q15043 492 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 SLC8B1Q6J4K2 584 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 ZNF280DQ6N043 979 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 SIX5Q8N196 739 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 TMEM105Q8N8V8 129 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 APPL2Q8NEU8 664 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 ZNF461Q8TAF7 563 aa15.54■□□□□ 0.08
RTN3P1-201ENST00000536295 ITFG1Q8TB96 612 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms