RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 UNC5CO95185 931 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 GAP43P17677 238 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 COPB2P35606 906 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 ADCY1Q08828 1119 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 EXOC3L4Q17RC7 722 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 ZNF365Q70YC5 407 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 LRRC8CQ8TDW0 803 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 IQCDQ96DY2 449 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 PCIF1Q9H4Z3 704 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.87□□□□□ -0.03
LIG1-203ENST00000536218 HNRNPRO43390 633 aaKnown RBP14.87□□□□□ -0.03
LIG1-203ENST00000536218 SKIP12755 728 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 CCNFP41002 786 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 BACE1P56817 501 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 KLHL30Q0D2K2 578 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 UBAP2Q5T6F2 1119 aaKnown RBP14.87□□□□□ -0.03
LIG1-203ENST00000536218 HGSNATQ68CP4 663 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 RIT2Q99578 217 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 FAM114A2Q9NRY5 505 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 RNF146Q9NTX7 359 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 TISP43B9A030 160 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 VWA5AO00534 786 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 PEX10O60683 326 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 GSTA2P09210 222 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 DCAF15Q66K64 600 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 SNRNP48Q6IEG0 339 aaKnown RBP14.87□□□□□ -0.03
LIG1-203ENST00000536218 ARHGAP27Q6ZUM4 889 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 ZNF720Q7Z2F6 126 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 FRMD5Q7Z6J6 570 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 ZNF280CQ8ND82 737 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 RNF25Q96BH1 459 aaPredicted RBP14.87□□□□□ -0.03
LIG1-203ENST00000536218 AGO4Q9HCK5 861 aaKnown RBP14.87□□□□□ -0.03
LIG1-203ENST00000536218 OLFML3Q9NRN5 406 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 GGA3Q9NZ52 723 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 DHX15O43143 795 aaKnown RBP14.87□□□□□ -0.03
LIG1-203ENST00000536218 PTPRAP18433 802 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 EPHB2P29323 1055 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 MARSP56192 900 aaKnown RBP14.87□□□□□ -0.03
LIG1-203ENST00000536218 BPIFB4P59827 614 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 PGM5Q15124 567 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 PABPC1LQ4VXU2 614 aaKnown RBP14.87□□□□□ -0.03
LIG1-203ENST00000536218 FOXR2Q6PJQ5 311 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 HS2ST1Q7LGA3 356 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 FAM186BQ8IYM0 893 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 ABTB1Q969K4 478 aaPredicted RBP14.87□□□□□ -0.03
LIG1-203ENST00000536218 PGM2Q96G03 612 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 TXLNGQ9NUQ3 528 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 CHMP2BQ9UQN3 213 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 LRCH1Q9Y2L9 728 aa14.87□□□□□ -0.03
LIG1-203ENST00000536218 E7ENQ6 273 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 K7ENM7 598 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 FZD9O00144 591 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 P4HBP07237 508 aaKnown RBP14.86□□□□□ -0.03
LIG1-203ENST00000536218 TRIM49P0CI25 452 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 TRIM49CP0CI26 452 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 PSMC4P43686 418 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 NPEPPSP55786 919 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 MPP3Q13368 585 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 SCYL3Q8IZE3 742 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 METTL13Q8N6R0 699 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 ERP27Q96DN0 273 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 DDX27Q96GQ7 796 aaKnown RBP14.86□□□□□ -0.03
LIG1-203ENST00000536218 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.86□□□□□ -0.032e-7■■■■□ 20.8
LIG1-203ENST00000536218 GPRC5CQ9NQ84 441 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.86□□□□□ -0.032e-7■■■■■ 129.7
LIG1-203ENST00000536218 SNX24Q9Y343 169 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 A0A087X0T9 212 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 FOXO6A8MYZ6 492 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 OAS1P00973 400 aaKnown RBP14.86□□□□□ -0.03
LIG1-203ENST00000536218 FAM228BP0C875 321 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 ASIC2Q16515 512 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 UGCGQ16739 394 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 ASTE1Q2TB18 679 aaPredicted RBP14.86□□□□□ -0.03
LIG1-203ENST00000536218 CNPY1Q3B7I2 92 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 PLA2G4FQ68DD2 849 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 ARL10Q8N8L6 244 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 IFT43Q96FT9 208 aa14.86□□□□□ -0.03
LIG1-203ENST00000536218 TSPYL2Q9H2G4 693 aaPredicted RBP14.86□□□□□ -0.03
LIG1-203ENST00000536218 PABPC3Q9H361 631 aaKnown RBP14.86□□□□□ -0.03
LIG1-203ENST00000536218 SERPING1P05155 500 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 UCHL3P15374 230 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 CREB1P16220 341 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 FGFR4P22455 802 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 PON1P27169 355 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 C6orf118Q5T5N4 469 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 PCNX4Q63HM2 1172 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 DAW1Q8N136 415 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 SLC35C1Q96A29 364 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 PDCD2LQ9BRP1 358 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 GCNT4Q9P109 453 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 UBIAD1Q9Y5Z9 338 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 AGTP01019 485 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 QARSP47897 775 aaKnown RBP14.85□□□□□ -0.03
LIG1-203ENST00000536218 SETDB1Q15047 1291 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 B3GNT9Q6UX72 402 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 DNAJC14Q6Y2X3 702 aaPredicted RBP14.85□□□□□ -0.03
LIG1-203ENST00000536218 TAOK1Q7L7X3 1001 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 CCDC25Q86WR0 208 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 DTX3LQ8TDB6 740 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 SNRNP27Q8WVK2 155 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms