RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, human

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-205	ENST00000536107	EIF4E1B	A6NMX2	242 aa	Known RBP	4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	PRR5-ARHGAP8	B1AHC4	643 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	LOC730098	B7Z3J9	87 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	SGSM2	O43147	1006 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	CYP7B1	O75881	506 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	CSPG5	O95196	566 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	IGKV5-2	P06315	115 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	CSF1R	P07333	972 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	ASNS	P08243	561 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	FCER1A	P12319	257 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	RFC2	P35250	354 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	LTBR	P36941	435 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	EIF4A3	P38919	411 aa	Known RBP	4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	MLLT6	P55198	1093 aa	Predicted RBP	4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	RIPK4	P57078	832 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	ARHGAP8	P85298	464 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	ITGA7	Q13683	1181 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	CR1L	Q2VPA4	569 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	TDRD10	Q5VZ19	366 aa	Known RBP	4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	LRSAM1	Q6UWE0	723 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	CXCL17	Q6UXB2	119 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	PPFIBP1	Q86W92	1011 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	RTKN	Q9BST9	563 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	PLA2G12B	Q9BX93	195 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	INCENP	Q9NQS7	918 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	KBTBD4	Q9NVX7	518 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	NCDN	Q9UBB6	729 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	CLSPN	Q9HAW4	1339 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	SPTBN2	O15020	2390 aa		4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	ASH1L	Q9NR48	2969 aa	Known RBP	4.85	□□□□□ -1.63
YBX3-205	ENST00000536107	FRMPD3	Q5JV73	1810 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	PI4KAP2	A4QPH2	592 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	FOXS1	O43638	330 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	DUSP11	O75319	330 aa	Known RBP	4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	BAIAP3	O94812	1187 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	FUCA1	P04066	466 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	PGK2	P07205	417 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	PROS1	P07225	676 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	HOXB7	P09629	217 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	SUPT20HL2	P0C7V6	817 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	CYP2C9	P11712	490 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	ICAM3	P32942	547 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	ZNF165	P49910	485 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	NKX3-2	P78367	333 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	BEX3	Q00994	111 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	NFATC3	Q12968	1075 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	RRP1B	Q14684	758 aa	Known RBP	4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	TCTN3	Q6NUS6	607 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	CATSPERG	Q6ZRH7	1159 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	LDLRAD3	Q86YD5	345 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	CPNE8	Q86YQ8	564 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	PI4KAP1	Q8N8J0	262 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	PLEKHO2	Q8TD55	490 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	NEU4	Q8WWR8	484 aa	Predicted RBP	4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	SEC14L1	Q92503	715 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	SECISBP2L	Q93073	1101 aa	Known RBP	4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	MMP19	Q99542	508 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	MCMBP	Q9BTE3	642 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	SPATC1L	Q9H0A9	340 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	SIL1	Q9H173	461 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	PNN	Q9H307	717 aa	Known RBP	4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	MROH8	Q9H579	483 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	BARX1	Q9HBU1	254 aa	Predicted RBP	4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	DDX4	Q9NQI0	724 aa	Known RBP	4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	ZNF451	Q9Y4E5	1061 aa		4.84	□□□□□ -1.63
YBX3-205	ENST00000536107	BRWD1	Q9NSI6	2320 aa		4.84	□□□□□ -1.64
YBX3-205	ENST00000536107	GCN1	Q92616	2671 aa	Known RBP	4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	TRBV23OR9-2	A0A075B6M9	112 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	C7orf72	A4D263	438 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	CYSRT1	A8MQ03	144 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	ELL2	O00472	640 aa	Predicted RBP	4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	ZEB2	O60315	1214 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	NPHS1	O60500	1241 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	CABYR	O75952	493 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	CNOT4	O95628	575 aa	Known RBP	4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	CST5	P28325	142 aa	Predicted RBP	4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	PRDX5	P30044	214 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	SEPHS1	P49903	392 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	CLCN5	P51795	746 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	USP14	P54578	494 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	WDR5	P61964	334 aa	Known RBP	4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	LMOD3	Q0VAK6	560 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	CSRP2	Q16527	193 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	EPC2	Q52LR7	807 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	SEZ6	Q53EL9	994 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	FAM47C	Q5HY64	1035 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	METTL24	Q5JXM2	366 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	LMBR1L	Q6UX01	489 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	KSR2	Q6VAB6	950 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	DZIP1	Q86YF9	867 aa	Known RBP	4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	UBALD2	Q8IYN6	164 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	ABRA	Q8N0Z2	381 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	KREMEN2	Q8NCW0	462 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	EXTL1	Q92935	676 aa		4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	PHF7	Q9BWX1	381 aa	Predicted RBP	4.83	□□□□□ -1.64
YBX3-205	ENST00000536107	MYH16	Q9H6N6	1097 aa		4.83	□□□□□ -1.64

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