RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 MIEF2Q96C03 454 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 KAZALD1Q96I82 304 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 EXOC2Q96KP1 924 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 NEUROD6Q96NK8 337 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 PTCHD1Q96NR3 888 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 CDC5LQ99459 802 aaKnown RBP7.19□□□□□ -1.26
USP28-202ENST00000535607 SLF1Q9BQI6 1058 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 MRPL4Q9BYD3 311 aaKnown RBP7.19□□□□□ -1.26
USP28-202ENST00000535607 TRIM6Q9C030 488 aaPredicted RBP7.19□□□□□ -1.26
USP28-202ENST00000535607 KANSL2Q9H9L4 492 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 ATP6V0A4Q9HBG4 840 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 GPRC5CQ9NQ84 441 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 SAMSN1Q9NSI8 373 aaKnown RBP7.19□□□□□ -1.26
USP28-202ENST00000535607 CLEC1BQ9P126 229 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 TNFRSF10DQ9UBN6 386 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 NDOR1Q9UHB4 597 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 PLAAQ9Y263 795 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 MAST3O60307 1309 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 MYH8P13535 1937 aa7.19□□□□□ -1.26
USP28-202ENST00000535607 C10orf71Q711Q0 1435 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 DLEC1Q9Y238 1755 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 KIF13BQ9NQT8 1826 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 A0A1W2PQJ5 194 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 TRIM75PA6NK02 468 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 GOLGA8AA7E2F4 631 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 KIF28PB7ZC32 967 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 POLRMTO00411 1230 aaKnown RBP7.18□□□□□ -1.26
USP28-202ENST00000535607 AQP7O14520 342 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 PLD2O14939 933 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 FGF10O15520 208 aaPredicted RBP7.18□□□□□ -1.26
USP28-202ENST00000535607 DLX3O60479 287 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 ADAM23O75077 832 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 DEXIO95424 95 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 FAM107AO95990 144 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 GYPCP04921 128 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 CSF1RP07333 972 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 PLS3P13797 630 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 TM4SF1P30408 202 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 DNM2P50570 870 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 CLNS1AP54105 237 aaKnown RBP7.18□□□□□ -1.26
USP28-202ENST00000535607 FOXO4P98177 505 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 UBXN1Q04323 297 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 CHRNEQ04844 493 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 PAK1Q13153 545 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 BIRC3Q13489 604 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 SF3B3Q15393 1217 aaKnown RBP7.18□□□□□ -1.26
USP28-202ENST00000535607 PRSS53Q2L4Q9 553 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 PLEKHG4Q58EX7 1191 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 ACBD5Q5T8D3 534 aaPredicted RBP7.18□□□□□ -1.26
USP28-202ENST00000535607 OTUD7BQ6GQQ9 843 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 NCAPH2Q6IBW4 605 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 C8orf74Q6P047 294 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 SLC23A3Q6PIS1 610 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 LRIG3Q6UXM1 1119 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 ZNF574Q6ZN55 896 aaPredicted RBP7.18□□□□□ -1.26
USP28-202ENST00000535607 MAMDC2Q7Z304 686 aaPredicted RBP7.18□□□□□ -1.26
USP28-202ENST00000535607 APLFQ8IW19 511 aaPredicted RBP7.18□□□□□ -1.26
USP28-202ENST00000535607 ANKS4BQ8N8V4 417 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 COPS5Q92905 334 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 PTPRN2Q92932 1015 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 OSBP2Q969R2 916 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 FAM89AQ96GI7 184 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 MOV10L1Q9BXT6 1211 aaKnown RBP7.18□□□□□ -1.26
USP28-202ENST00000535607 KRT23Q9C075 422 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 HOMER3Q9NSC5 361 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 FBXO2Q9UK22 296 aaPredicted RBP7.18□□□□□ -1.26
USP28-202ENST00000535607 TMEM59LQ9UK28 342 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 HYOU1Q9Y4L1 999 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 LRRC37AA6NMS7 1700 aa7.18□□□□□ -1.26
USP28-202ENST00000535607 ANKRD31Q8N7Z5 1873 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 BICDL2A1A5D9 508 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 KIAA1324LA8MWY0 1029 aaPredicted RBP7.17□□□□□ -1.26
USP28-202ENST00000535607 KCNJ18B7U540 433 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 RBAK-RBAKDNI3L0D1 243 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 NPHS1O60500 1241 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 LUC7L3O95232 432 aaKnown RBP7.17□□□□□ -1.26
USP28-202ENST00000535607 FGFR1OPO95684 399 aaKnown RBP7.17□□□□□ -1.26
USP28-202ENST00000535607 MMP1P03956 469 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 GHRP10912 638 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 IFNAR1P17181 557 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 SPINK2P20155 84 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 LTBRP36941 435 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 LIFRP42702 1097 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 FNTAP49354 379 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 HK2P52789 917 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 ICA1Q05084 483 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 IFIT5Q13325 482 aaKnown RBP7.17□□□□□ -1.26
USP28-202ENST00000535607 CUL4BQ13620 913 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 KCNJ12Q14500 433 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 SF1Q15637 639 aaKnown RBP7.17□□□□□ -1.26
USP28-202ENST00000535607 SKIDA1Q1XH10 827 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 CCDC57Q2TAC2 916 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 CRY2Q49AN0 593 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 CFAP221Q4G0U5 840 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 CCDC38Q502W7 563 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 TCP11X2Q5H9J9 407 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 SPECC1Q5M775 1068 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 RTP2Q5QGT7 225 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 FKBP15Q5T1M5 1219 aa7.17□□□□□ -1.26
USP28-202ENST00000535607 FOXB2Q5VYV0 432 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms