RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 HAUS6Q7Z4H7 955 aa17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 SIX5Q8N196 739 aa17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 SLC44A3Q8N4M1 653 aa17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 TMEM105Q8N8V8 129 aa17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 PLEKHA5Q9HAU0 1116 aa17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 PARVGQ9HBI0 331 aa17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 CITO14578 2027 aa17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 K7ENM7 598 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 NARSO43776 548 aaKnown RBP17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 TBCAO75347 108 aaKnown RBP17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 CFHP08603 1231 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 POU2F2P09086 479 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 CLTAP09496 248 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 SRFP11831 508 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 MCM4P33991 863 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 NTHL1P78549 312 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 MCM6Q14566 821 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 KYAT1Q16773 422 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 RAD54LQ92698 747 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 ATOH1Q92858 354 aaPredicted RBP17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 KCNN1Q92952 543 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 ZHX3Q9H4I2 956 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 BLOC1S4Q9NUP1 217 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 WNT16Q9UBV4 365 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 CDH7Q9ULB5 785 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 TBX20Q9UMR3 447 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 DOCK8Q8NF50 2099 aa17.66■□□□□ 0.42
CLSTN3-204ENST00000535313 ANHXE9PGG2 379 aa17.65■□□□□ 0.42
CLSTN3-204ENST00000535313 H7C4K7 107 aa17.65■□□□□ 0.42
CLSTN3-204ENST00000535313 HNRNPDLO14979 420 aaKnown RBP17.65■□□□□ 0.42
CLSTN3-204ENST00000535313 MEFVO15553 781 aaPredicted RBP17.65■□□□□ 0.42
CLSTN3-204ENST00000535313 CXCL8P10145 99 aa17.65■□□□□ 0.42
CLSTN3-204ENST00000535313 RFX1P22670 979 aa17.65■□□□□ 0.42
CLSTN3-204ENST00000535313 ELF1P32519 619 aa17.65■□□□□ 0.42
CLSTN3-204ENST00000535313 ZNF131P52739 623 aa17.65■□□□□ 0.42
CLSTN3-204ENST00000535313 GRIN1Q05586 938 aa17.65■□□□□ 0.42
CLSTN3-204ENST00000535313 SLC8B1Q6J4K2 584 aa17.65■□□□□ 0.42
CLSTN3-204ENST00000535313 ZNF461Q8TAF7 563 aa17.65■□□□□ 0.42
CLSTN3-204ENST00000535313 PHOX2BQ99453 314 aa17.65■□□□□ 0.42
CLSTN3-204ENST00000535313 H0Y858 1186 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 STK25O00506 426 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 PRRG1O14668 218 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 TRAK2O60296 914 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 AOC1P19801 751 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 ABCD1P33897 745 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 ARPP19P56211 112 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 ROR1Q01973 937 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 PPP2R3AQ06190 1150 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 HTR4Q13639 388 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 PABPC1LQ4VXU2 614 aaKnown RBP17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 CWF19L1Q69YN2 538 aaKnown RBP17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 APPL2Q8NEU8 664 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 LRRC15Q8TF66 581 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 LARP4BQ92615 738 aaKnown RBP17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 KIF12Q96FN5 646 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 SUSD3Q96L08 255 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 CCSER1Q9C0I3 900 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 TUBGCP4Q9UGJ1 667 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 KCNH3Q9ULD8 1083 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 NUMBLQ9Y6R0 609 aa17.64■□□□□ 0.41
CLSTN3-204ENST00000535313 XPOTO43592 962 aaKnown RBP17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 PIGRP01833 764 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 NPR3P17342 541 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 MARCKSP29966 332 aaPredicted RBP17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 DDIT3P35638 169 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 CTXN3Q4LDR2 81 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 MTSS1LQ765P7 747 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 KRI1Q8N9T8 703 aaKnown RBP17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 ITFG1Q8TB96 612 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 FGF13Q92913 245 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 RTP3Q9BQQ7 232 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 HAPLN2Q9GZV7 340 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 RPF1Q9H9Y2 349 aaKnown RBP17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 FAM86C1Q9NVL1 165 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 HCFC1R1Q9NWW0 138 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 DNMT3BQ9UBC3 853 aaKnown RBP17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 CCDC39Q9UFE4 941 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 FBXL5Q9UKA1 691 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 UBQLN1Q9UMX0 589 aaKnown RBP17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 CLIC4Q9Y696 253 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 DOCK6Q96HP0 2047 aa17.63■□□□□ 0.41
CLSTN3-204ENST00000535313 TTC26A0AVF1 554 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 WDR27A2RRH5 827 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 OGTO15294 1046 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 TBC1D4O60343 1298 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 ABLIM3O94929 683 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 LRG1P02750 347 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 ATF2P15336 505 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 CYP3A5P20815 502 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 TXLNAP40222 546 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 SPAG1Q07617 926 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 MRPL58Q14197 206 aaKnown RBP17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 ZNF280DQ6N043 979 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 ST13P5Q8NFI4 369 aaPredicted RBP17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 DDX12PQ92771 950 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 EPSTI1Q96J88 318 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 TSPAN18Q96SJ8 248 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 MSTO1Q9BUK6 570 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 CYP4F11Q9HBI6 524 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms