RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 PSPC1Q8WXF1 523 aaKnown RBP9.22□□□□□ -0.93
CLIP1-206ENST00000535290 CCDC51Q96ER9 411 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 MSANTD3Q96H12 275 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 LRRC3BQ96PB8 259 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 JPH2Q9BR39 696 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-206ENST00000535290 MTA3Q9BTC8 594 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 TEKT3Q9BXF9 490 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 LRRC2Q9BYS8 371 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 CXCL16Q9H2A7 254 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 TRPV4Q9HBA0 871 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 BMP2KQ9NSY1 1161 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-206ENST00000535290 GTSE1Q9NYZ3 720 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 PARP2Q9UGN5 583 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 TICRRQ7Z2Z1 1910 aa9.21□□□□□ -0.93
CLIP1-206ENST00000535290 FREM2Q5SZK8 3169 aa9.21□□□□□ -0.93
CLIP1-206ENST00000535290 CELSR3Q9NYQ7 3312 aa9.21□□□□□ -0.93
CLIP1-206ENST00000535290 FAM221BA6H8Z2 402 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 hCG_1984214I3L0E3 225 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 KHNYNO15037 678 aaKnown RBP9.21□□□□□ -0.94
CLIP1-206ENST00000535290 CHADO15335 359 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 PSMD10O75832 226 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 PRB1P04280 392 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 ARF4P18085 180 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-206ENST00000535290 AXLP30530 894 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 MCM5P33992 734 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 IRX4P78413 519 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 SIM1P81133 766 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-206ENST00000535290 SPIRE1Q08AE8 756 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 ELAVL2Q12926 359 aaKnown RBP9.21□□□□□ -0.94
CLIP1-206ENST00000535290 HDAC1Q13547 482 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-206ENST00000535290 ELF2Q15723 593 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 AMHR2Q16671 573 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 B3GNT9Q6UX72 402 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-206ENST00000535290 PDZD4Q76G19 769 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-206ENST00000535290 FERMT3Q86UX7 667 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 CHCHD4Q8N4Q1 142 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 ZNF713Q8N859 430 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-206ENST00000535290 RDM1Q8NG50 284 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 FAM200AQ8TCP9 573 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 SLC7A3Q8WY07 619 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 LRIG1Q96JA1 1093 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 CCDC136Q96JN2 1154 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 ZFYVE19Q96K21 471 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 TMEM87BQ96K49 555 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 MKNK1Q9BUB5 465 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 TRIM6Q9C030 488 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-206ENST00000535290 DHX33Q9H6R0 707 aaKnown RBP9.21□□□□□ -0.94
CLIP1-206ENST00000535290 SLC8A2Q9UPR5 921 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 BACE2Q9Y5Z0 518 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 SPTA1P02549 2419 aa9.21□□□□□ -0.94
CLIP1-206ENST00000535290 URB1O60287 2271 aaKnown RBP9.2□□□□□ -0.94
CLIP1-206ENST00000535290 TULP1O00294 542 aaPredicted RBP9.2□□□□□ -0.94
CLIP1-206ENST00000535290 PRRG1O14668 218 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 PTGESO14684 152 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 MEFVO15553 781 aaPredicted RBP9.2□□□□□ -0.94
CLIP1-206ENST00000535290 B4GALT5O43286 388 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 RHOBTB1O94844 696 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 ABLIM3O94929 683 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 SEC24AO95486 1093 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 NPTXRO95502 500 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 PTENP60484 403 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 ROR1Q01973 937 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 FCHO2Q0JRZ9 810 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 TEAD2Q15562 447 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 NAB2Q15742 525 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 CYP4A22Q5TCH4 519 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 CD300LGQ6UXG3 332 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 YAF2Q8IY57 180 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 HACE1Q8IYU2 909 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 REXO1Q8N1G1 1221 aaKnown RBP9.2□□□□□ -0.94
CLIP1-206ENST00000535290 ZNF461Q8TAF7 563 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
CLIP1-206ENST00000535290 HHIPQ96QV1 700 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 ZMYND12Q9H0C1 365 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 CEP72Q9P209 647 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 GTF3C3Q9Y5Q9 886 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 HECTD1Q9ULT8 2610 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 GON4LQ3T8J9 2241 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 ZNF462Q96JM2 2506 aa9.2□□□□□ -0.94
CLIP1-206ENST00000535290 LAMA1P25391 3075 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 ABCA7Q8IZY2 2146 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 I3L4J1 428 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 INO80B-WBP1J3KQ70 363 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 MYL4P12829 197 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 TKTP29401 623 aaKnown RBP9.19□□□□□ -0.94
CLIP1-206ENST00000535290 ELF1P32519 619 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 PSMC5P62195 406 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 FAM193AP78312 1265 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 MBTD1Q05BQ5 628 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 TNK2Q07912 1038 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 NCBP1Q09161 790 aaKnown RBP9.19□□□□□ -0.94
CLIP1-206ENST00000535290 PCBP1Q15365 356 aaKnown RBP eCLIP9.19□□□□□ -0.94
CLIP1-206ENST00000535290 PIP4P1Q86T03 277 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 SGMS1Q86VZ5 419 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 CHD1LQ86WJ1 897 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 TCEAL8Q8IYN2 117 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 CAMKK1Q8N5S9 505 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 SHKBP1Q8TBC3 707 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 CEP170P1Q96L14 293 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms