RNA–Protein interactions for RNA: ENST00000535106.5

VPS45-211, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-211ENST00000535106 SPIRE2Q8WWL2 714 aa12.87□□□□□ -0.35
VPS45-211ENST00000535106 DDX27Q96GQ7 796 aaKnown RBP12.87□□□□□ -0.35
VPS45-211ENST00000535106 ZBED3Q96IU2 234 aaPredicted RBP12.87□□□□□ -0.35
VPS45-211ENST00000535106 KDM4CQ9H3R0 1056 aa12.87□□□□□ -0.35
VPS45-211ENST00000535106 WHRNQ9P202 907 aa12.87□□□□□ -0.35
VPS45-211ENST00000535106 PCDHA10Q9Y5I2 948 aa12.87□□□□□ -0.35
VPS45-211ENST00000535106 RGS20O76081 388 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 VIMP08670 466 aaKnown RBP12.86□□□□□ -0.35
VPS45-211ENST00000535106 VPS41P49754 854 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 ITGA8P53708 1063 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 GCNT1Q02742 428 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 MTMR2Q13614 643 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 KYNUQ16719 465 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 SCARA3Q6AZY7 606 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 SWSAP1Q6NVH7 229 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 TRMT10CQ7L0Y3 403 aaKnown RBP12.86□□□□□ -0.35
VPS45-211ENST00000535106 PRUNE1Q86TP1 453 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 SLC17A8Q8NDX2 589 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 RUNDC3BQ96NL0 473 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 DCLK3Q9C098 648 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 PDGFDQ9GZP0 370 aaPredicted RBP12.86□□□□□ -0.35
VPS45-211ENST00000535106 KIAA1683Q9H0B3 1180 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 CCDC134Q9H6E4 229 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 MLXIPLQ9NP71 852 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 PTPRJQ12913 1337 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 GTF2H1P32780 548 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 ACCSLQ4AC99 568 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 CYB5D1Q6P9G0 228 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 VSTM1Q6UX27 236 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 C15orf39Q6ZRI6 1047 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 SAMD3Q8N6K7 520 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 LPAR1Q92633 364 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 TRIM6Q9C030 488 aaPredicted RBP12.86□□□□□ -0.35
VPS45-211ENST00000535106 PDLIM7Q9NR12 457 aa12.86□□□□□ -0.35
VPS45-211ENST00000535106 TPX2Q9ULW0 747 aaKnown RBP12.86□□□□□ -0.35
VPS45-211ENST00000535106 RALAP11233 206 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 CDC25CP30307 473 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 MPP2Q14168 576 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 NAA25Q14CX7 972 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 NLRX1Q86UT6 975 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 VSIG10LQ86VR7 867 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 PASD1Q8IV76 773 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 MTMR14Q8NCE2 650 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 ARHGEF2Q92974 986 aaKnown RBP12.85□□□□□ -0.35
VPS45-211ENST00000535106 ATG4CQ96DT6 458 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 BICD1Q96G01 975 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 TEPSINQ96N21 525 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 ROPN1BQ9BZX4 212 aaPredicted RBP12.85□□□□□ -0.35
VPS45-211ENST00000535106 RPAP3Q9H6T3 665 aaPredicted RBP12.85□□□□□ -0.35
VPS45-211ENST00000535106 ROPN1Q9HAT0 212 aaPredicted RBP12.85□□□□□ -0.35
VPS45-211ENST00000535106 PSME4Q14997 1843 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 GJB6O95452 261 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 NR3C2P08235 984 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 CETPP11597 493 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 ITIH2P19823 946 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 DSG3P32926 999 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 ACOT2P49753 483 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 TAS2R40P59535 323 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 CXCL9Q07325 125 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 PTK6Q13882 451 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 C11orf91Q3C1V1 193 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 TDRD10Q5VZ19 366 aaKnown RBP12.85□□□□□ -0.35
VPS45-211ENST00000535106 CCDC60Q8IWA6 550 aaPredicted RBP12.85□□□□□ -0.35
VPS45-211ENST00000535106 CYP4X1Q8N118 509 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 TTLL6Q8N841 843 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 SNF8Q96H20 258 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.85□□□□□ -0.35
VPS45-211ENST00000535106 GGT7Q9UJ14 662 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 NEU2Q9Y3R4 380 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 UMODL1Q5DID0 1318 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 TMEM120BA0PK00 339 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 VWA5AO00534 786 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 TTC4O95801 387 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 CYP1A1P04798 512 aaPredicted RBP12.85□□□□□ -0.35
VPS45-211ENST00000535106 KCNA2P16389 499 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 NLRP11P59045 1033 aaKnown RBP12.85□□□□□ -0.35
VPS45-211ENST00000535106 XRCC4Q13426 336 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 CROCCP2Q86T23 111 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 PARP9Q8IXQ6 854 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 HAPLN2Q9GZV7 340 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 AVENQ9NQS1 362 aaPredicted RBP12.85□□□□□ -0.35
VPS45-211ENST00000535106 C1orf112Q9NSG2 853 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 MAP3K20Q9NYL2 800 aaKnown RBP12.85□□□□□ -0.35
VPS45-211ENST00000535106 PCDHB2Q9Y5E7 798 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 CD2APQ9Y5K6 639 aa12.85□□□□□ -0.35
VPS45-211ENST00000535106 VNN1O95497 513 aa12.84□□□□□ -0.35
VPS45-211ENST00000535106 GH1P01241 217 aa12.84□□□□□ -0.35
VPS45-211ENST00000535106 HLA-DRAP01903 254 aa12.84□□□□□ -0.35
VPS45-211ENST00000535106 GHRP10912 638 aa12.84□□□□□ -0.35
VPS45-211ENST00000535106 ACO1P21399 889 aaKnown RBP12.84□□□□□ -0.35
VPS45-211ENST00000535106 ADCY8P40145 1251 aa12.84□□□□□ -0.35
VPS45-211ENST00000535106 KLF1Q13351 362 aaPredicted RBP12.84□□□□□ -0.35
VPS45-211ENST00000535106 SNCBQ16143 134 aa12.84□□□□□ -0.35
VPS45-211ENST00000535106 BRDTQ58F21 947 aaPredicted RBP12.84□□□□□ -0.35
VPS45-211ENST00000535106 TLDC1Q6P9B6 456 aa12.84□□□□□ -0.35
VPS45-211ENST00000535106 SEPT14Q6ZU15 432 aa12.84□□□□□ -0.35
VPS45-211ENST00000535106 MON1BQ7L1V2 547 aa12.84□□□□□ -0.35
VPS45-211ENST00000535106 RTKN2Q8IZC4 609 aa12.84□□□□□ -0.35
VPS45-211ENST00000535106 ZBTB45Q96K62 511 aaPredicted RBP12.84□□□□□ -0.35
VPS45-211ENST00000535106 C11orf70Q9BRQ4 267 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms