RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 FAM228BP0C875 321 aa21.88■■□□□ 1.09
TNFRSF1A-205ENST00000534885 MYL6P60660 151 aa21.88■■□□□ 1.09
TNFRSF1A-205ENST00000534885 KRT83P78385 493 aa21.88■■□□□ 1.09
TNFRSF1A-205ENST00000534885 C1orf127Q8N9H9 656 aa21.88■■□□□ 1.09
TNFRSF1A-205ENST00000534885 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.88■■□□□ 1.096e-7■□□□□ 9.6
TNFRSF1A-205ENST00000534885 APOL6Q9BWW8 343 aa21.88■■□□□ 1.09
TNFRSF1A-205ENST00000534885 AGO3Q9H9G7 860 aaKnown RBP21.88■■□□□ 1.09
TNFRSF1A-205ENST00000534885 GOLGA6L9A6NEM1 432 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 DNM1LO00429 736 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 CLSTN1O94985 981 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 ASS1P00966 412 aaKnown RBP21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 USP8P40818 1118 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 SPA17Q15506 151 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 TWF2Q6IBS0 349 aaKnown RBP21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 FAM71AQ8IYT1 594 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 RCCD1A6NED2 376 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 ARVCFO00192 962 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 RECQL4O94761 1208 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 AKAP5P24588 427 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 ARHGAP25P42331 645 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 TMEM132DQ14C87 1099 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 SLC18A3Q16572 532 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 FBXO47Q5MNV8 452 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 SNX27Q96L92 541 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 IMPG2Q9BZV3 1241 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 TRIM10Q9UDY6 481 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 SIX4Q9UIU6 781 aa21.87■■□□□ 1.09
TNFRSF1A-205ENST00000534885 GHRP10912 638 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 GUCY2FP51841 1108 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 TRPC3Q13507 836 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 ZNF618Q5T7W0 954 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 FMNL3Q8IVF7 1028 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 OLIG1Q8TAK6 271 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 PKNOX2Q96KN3 472 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 IFIH1Q9BYX4 1025 aaKnown RBP21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 IRX2Q9BZI1 471 aaPredicted RBP21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 RNF39Q9H2S5 420 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 OFD1O75665 1012 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 CUL2Q13617 745 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 ENOSF1Q7L5Y1 443 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 KIAA1328Q86T90 577 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 SMG8Q8ND04 991 aaKnown RBP21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 CXorf38Q8TB03 319 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 KIF12Q96FN5 646 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 ZMAT2Q96NC0 199 aaKnown RBP21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 SYT11Q9BT88 431 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 LACRTQ9GZZ8 138 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 XYLT2Q9H1B5 865 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 ACP6Q9NPH0 428 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 RNF19AQ9NV58 838 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 OGDHLQ9ULD0 1010 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 C2CD2Q9Y426 696 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 IPPQ9Y573 584 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 PCDHA13Q9Y5I0 950 aa21.86■■□□□ 1.09
TNFRSF1A-205ENST00000534885 CYP26A1O43174 497 aa21.85■■□□□ 1.09
TNFRSF1A-205ENST00000534885 ITGB3P05106 788 aa21.85■■□□□ 1.09
TNFRSF1A-205ENST00000534885 KRT19P08727 400 aa21.85■■□□□ 1.09
TNFRSF1A-205ENST00000534885 CCDC172P0C7W6 258 aa21.85■■□□□ 1.09
TNFRSF1A-205ENST00000534885 CD52P31358 61 aa21.85■■□□□ 1.09
TNFRSF1A-205ENST00000534885 YARSP54577 528 aaKnown RBP21.85■■□□□ 1.09
TNFRSF1A-205ENST00000534885 ARHGAP29Q52LW3 1261 aa21.85■■□□□ 1.09
TNFRSF1A-205ENST00000534885 PLEKHA5Q9HAU0 1116 aa21.85■■□□□ 1.09
TNFRSF1A-205ENST00000534885 PADI3Q9ULW8 664 aa21.85■■□□□ 1.09
TNFRSF1A-205ENST00000534885 PDCD11Q14690 1871 aaKnown RBP21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 CKBP12277 381 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 VAV2P52735 878 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 LPIN1Q14693 890 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 SGSM1Q2NKQ1 1148 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 FAM26DQ5JW98 314 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 GPR182O15218 404 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 SGPL1O95470 568 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 ZNF699Q32M78 642 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 GLRA4Q5JXX5 417 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 ALKAL1Q6UXT8 129 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 SLC47A2Q86VL8 602 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 CD302Q8IX05 232 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 SLC20A1Q8WUM9 679 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 FAM81BQ96LP2 452 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 ERVK-5Q9HDB9 667 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 KLK14Q9P0G3 267 aa21.84■■□□□ 1.09
TNFRSF1A-205ENST00000534885 DDX3XO00571 662 aaKnown RBP eCLIP21.83■■□□□ 1.098e-9■■□□□ 12.8
TNFRSF1A-205ENST00000534885 KRT5P13647 590 aa21.83■■□□□ 1.09
TNFRSF1A-205ENST00000534885 CDK7P50613 346 aa21.83■■□□□ 1.09
TNFRSF1A-205ENST00000534885 GLYCTKQ8IVS8 523 aa21.83■■□□□ 1.09
TNFRSF1A-205ENST00000534885 LNX1Q8TBB1 728 aaPredicted RBP21.83■■□□□ 1.09
TNFRSF1A-205ENST00000534885 EPS8L1Q8TE68 723 aa21.83■■□□□ 1.09
TNFRSF1A-205ENST00000534885 JAKMIP2Q96AA8 810 aa21.83■■□□□ 1.09
TNFRSF1A-205ENST00000534885 CNTN3Q9P232 1028 aa21.83■■□□□ 1.09
TNFRSF1A-205ENST00000534885 PARP2Q9UGN5 583 aa21.83■■□□□ 1.09
TNFRSF1A-205ENST00000534885 DUSP10Q9Y6W6 482 aa21.83■■□□□ 1.09
TNFRSF1A-205ENST00000534885 MKI67P46013 3256 aaKnown RBP21.83■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ACO1P21399 889 aaKnown RBP21.83■■□□□ 1.08
TNFRSF1A-205ENST00000534885 MAGEA1P43355 309 aa21.83■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ETF1P62495 437 aaKnown RBP21.83■■□□□ 1.08
TNFRSF1A-205ENST00000534885 PAK2Q13177 524 aa21.83■■□□□ 1.08
TNFRSF1A-205ENST00000534885 TRAF7Q6Q0C0 670 aa21.83■■□□□ 1.08
TNFRSF1A-205ENST00000534885 NT5DC4Q86YG4 428 aa21.83■■□□□ 1.08
TNFRSF1A-205ENST00000534885 ZNF592Q92610 1267 aa21.83■■□□□ 1.08
TNFRSF1A-205ENST00000534885 DPP3Q9NY33 737 aa21.83■■□□□ 1.08
TNFRSF1A-205ENST00000534885 NAGPAQ9UK23 515 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms