RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 MAPK7Q13164 816 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 STK38Q15208 465 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 ZNF568Q3ZCX4 644 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 GLRA4Q5JXX5 417 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 HYIQ5T013 277 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 KIAA1841Q6NSI8 718 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 USP49Q70CQ1 688 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 SND1Q7KZF4 910 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 TAS1R1Q7RTX1 841 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 APBB1IPQ7Z5R6 666 aaPredicted RBP9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 GLYCTKQ8IVS8 523 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 FAM178BQ8IXR5 827 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 COLGALT2Q8IYK4 626 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 GJD3Q8N144 294 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 MYCT1Q8N699 235 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 RSPH1Q8WYR4 309 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 RAD54LQ92698 747 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 SNX21Q969T3 373 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 B3GALT6Q96L58 329 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 USP28Q96RU2 1077 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 TMEM175Q9BSA9 504 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 MKNK1Q9BUB5 465 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 TARS2Q9BW92 718 aaKnown RBP9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 COLEC11Q9BWP8 271 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 VN1R3Q9BXE9 311 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 MRPL4Q9BYD3 311 aaKnown RBP9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 IRX2Q9BZI1 471 aaPredicted RBP9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 ZBP1Q9H171 429 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 CD320Q9NPF0 282 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 RAB6BQ9NRW1 208 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 ANKFY1Q9P2R3 1169 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 CCDC39Q9UFE4 941 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 SERTAD1Q9UHV2 236 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 PHLPP2Q6ZVD8 1323 aa9.8□□□□□ -0.84
CCDC90B-219ENST00000534753 TBCAO75347 108 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 TADA2AO75478 443 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 URODP06132 367 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 THP07101 528 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 WEE2P0C1S8 567 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 CTSAP10619 480 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 PLS3P13797 630 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 GUCY2CP25092 1073 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 TXLNAP40222 546 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 YARSP54577 528 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 GDF10P55107 478 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 DHX9Q08211 1270 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 GRIK3Q13003 919 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 SMAD4Q13485 552 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 COL19A1Q14993 1142 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 PTPAQ15257 358 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 DCAF4L1Q3SXM0 396 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 SEZ6Q53EL9 994 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 ARSHQ5FYA8 562 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 KANK3Q6NY19 840 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 CAPN12Q6ZSI9 719 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 DYMQ7RTS9 669 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 C12orf76Q8N812 135 aaPredicted RBP9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 LRRC15Q8TF66 581 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 ZBTB45Q96K62 511 aaPredicted RBP9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 MSLNLQ96KJ4 702 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 RPGRIP1Q96KN7 1286 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 CDCA3Q99618 268 aaPredicted RBP9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 ACO2Q99798 780 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 REEP2Q9BRK0 252 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 PAAF1Q9BRP4 392 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 TIPINQ9BVW5 301 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 ZSCAN16Q9H4T2 348 aaPredicted RBP9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 ETNK1Q9HBU6 452 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 MRPL17Q9NRX2 175 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 FBXO2Q9UK22 296 aaPredicted RBP9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 USP15Q9Y4E8 981 aaPredicted RBP9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 VCANP13611 3396 aa9.79□□□□□ -0.84
CCDC90B-219ENST00000534753 K7ENM7 598 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 SPATA31D3P0C874 917 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 EPCAMP16422 314 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 HSP90AA2PQ14568 343 aaPredicted RBP9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 PTPN14Q15678 1187 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 SMAD2Q15796 467 aaKnown RBP9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 RARS2Q5T160 578 aaKnown RBP9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 RRAGBQ5VZM2 374 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 ANKRD54Q6NXT1 300 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 SPATA31D4Q6ZUB0 917 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 TAS1R3Q7RTX0 852 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 CEP57Q86XR8 500 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 PDILTQ8N807 584 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 CEP120Q8N960 986 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 GSTCDQ8NEC7 633 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 LARP4BQ92615 738 aaKnown RBP9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 CASP10Q92851 521 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 ZNF396Q96N95 335 aaPredicted RBP9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 CCDC94Q9BW85 323 aaPredicted RBP9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 EMILIN2Q9BXX0 1053 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 CDT1Q9H211 546 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 EPHX3Q9H6B9 360 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 C17orf75Q9HAS0 396 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 BLOC1S4Q9NUP1 217 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 MARCH5Q9NX47 278 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 LARSQ9P2J5 1176 aaKnown RBP9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 ARHGAP28Q9P2N2 729 aa9.78□□□□□ -0.84
CCDC90B-219ENST00000534753 CDH22Q9UJ99 828 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms