RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 TXNRD3Q86VQ6 643 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 CCNYL1Q8N7R7 359 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 SNX31Q8N9S9 440 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 SEPT1Q8WYJ6 367 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 KIF12Q96FN5 646 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 HIST1H2AHQ96KK5 128 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 HIST1H2AJQ99878 128 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 H2AFJQ9BTM1 129 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 ZCWPW1Q9H0M4 648 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 POLRMTO00411 1230 aaKnown RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 PRKCBP05771 671 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 EFNA5P52803 228 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 PMS1P54277 932 aaKnown RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 DEUP1Q05D60 604 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 MRPL28Q13084 256 aaKnown RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 SNX17Q15036 470 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 KDELC2Q7Z4H8 507 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 TMEM35BQ8NCS4 154 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 KAZALD1Q96I82 304 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 SEPT5Q99719 369 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 KATNAL1Q9BW62 490 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 KCNF1Q9H3M0 494 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 DNAJC17Q9NVM6 304 aaKnown RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 STAP1Q9ULZ2 295 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 EIF4E1BA6NMX2 242 aaKnown RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 FOXN1O15353 648 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 CTSHP09668 335 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 LCP1P13796 627 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 CAP2P40123 477 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 TRPC1P48995 793 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 CHST13Q8NET6 341 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 TMEM143Q96AN5 459 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 KLHL29Q96CT2 875 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 FAM217BQ9NTX9 383 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 FBXO2Q9UK22 296 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 CNTNAP5Q8WYK1 1306 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 RICTORQ6R327 1708 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 TJP3O95049 919 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 NMT1P30419 496 aaKnown RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 CCDC15Q0P6D6 951 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 SMAD1Q15797 465 aaKnown RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 CCDC144BQ3MJ40 725 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 FAM133BQ5BKY9 247 aaKnown RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 DDX42Q86XP3 938 aaKnown RBP eCLIP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 UBE4BO95155 1302 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 TRAPPC3O43617 180 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 KRT4P19013 534 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 SMARCA1P28370 1054 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 TBL3Q12788 808 aaKnown RBP9.29□□□□□ -0.92
CTNND1-237ENST00000534579 GRAMD1BQ3KR37 738 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 KCTD16Q68DU8 428 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 GUF1Q8N442 669 aaKnown RBP9.29□□□□□ -0.92
CTNND1-237ENST00000534579 RPRD1BQ9NQG5 326 aaKnown RBP9.29□□□□□ -0.92
CTNND1-237ENST00000534579 DTNAQ9Y4J8 743 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 DGAT1O75907 488 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 TBXAS1P24557 533 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-237ENST00000534579 MORF4L2Q15014 288 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 SPDYAQ5MJ70 313 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 KRT39Q6A163 491 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 C16orf87Q6PH81 154 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 CYTH2Q99418 400 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 NUDT12Q9BQG2 462 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.29□□□□□ -0.92
CTNND1-237ENST00000534579 PCDHB7Q9Y5E2 793 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 NWD1Q149M9 1564 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 NEURL4Q96JN8 1562 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 COPEO14579 308 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 ESRRAP11474 423 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-237ENST00000534579 GTF2A2P52657 109 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 CXCL9Q07325 125 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 FSCBQ5H9T9 825 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 ITPRIPL1Q6GPH6 555 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 ERAP2Q6P179 960 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 RHOT2Q8IXI1 618 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 OR6P1Q8NGX9 317 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 PBKQ96KB5 322 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 INTS2Q9H0H0 1204 aaKnown RBP9.29□□□□□ -0.92
CTNND1-237ENST00000534579 UNC45AQ9H3U1 944 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 MFSD1Q9H3U5 465 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 MEFVO15553 781 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-237ENST00000534579 TRIM49P0CI25 452 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 TRIM49CP0CI26 452 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 SOAT1P35610 550 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 MAP3K10Q02779 954 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 SFSWAPQ12872 951 aaKnown RBP9.29□□□□□ -0.92
CTNND1-237ENST00000534579 NBPF9Q3BBW0 867 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 C3orf67Q6ZVT6 689 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 PDIK1LQ8N165 341 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 ENTPD7Q9NQZ7 604 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 FBXO28Q9NVF7 368 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 CNOT8Q9UFF9 292 aaKnown RBP9.29□□□□□ -0.92
CTNND1-237ENST00000534579 ANAPC7Q9UJX3 599 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 A8MXQ7 604 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 LRG1P02750 347 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 TMPRSS15P98073 1019 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 KRT17Q04695 432 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 C2orf54Q08AI8 447 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 ACER1Q8TDN7 264 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 TTC17Q96AE7 1141 aa9.29□□□□□ -0.92
CTNND1-237ENST00000534579 TAF6LQ9Y6J9 622 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms