RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	AKT1	P31749	480 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	EIF3E	P60228	445 aa	Known RBP	16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	FBXO16	Q8IX29	292 aa	Predicted RBP	16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	LZIC	Q8WZA0	190 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	SLC30A1	Q9Y6M5	507 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	FAM205C	A6NFA0	338 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	EGFR	P00533	1210 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	RAG1	P15918	1043 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	MRPS31	Q92665	395 aa	Known RBP	16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	GMCL1	Q96IK5	515 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	SENP7	Q9BQF6	1050 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	ABI2	Q9NYB9	513 aa	Predicted RBP	16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	EEF2K	O00418	725 aa	Known RBP	16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	B3GAT3	O94766	335 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	SESN3	P58005	492 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	ZSCAN26	Q16670	478 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	RCOR2	Q8IZ40	523 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	16.59	■□□□□ 0.25	2e-6	■■■■□ 21
NCAPD3-213	ENST00000534532	MKNK1	Q9BUB5	465 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	ATP9B	O43861	1147 aa		16.58	■□□□□ 0.25
NCAPD3-213	ENST00000534532	RHOBTB3	O94955	611 aa		16.58	■□□□□ 0.25
NCAPD3-213	ENST00000534532	MYB	P10242	640 aa		16.58	■□□□□ 0.25
NCAPD3-213	ENST00000534532	PDCD7	Q8N8D1	485 aa	Known RBP	16.58	■□□□□ 0.25
NCAPD3-213	ENST00000534532	SOCS4	Q8WXH5	440 aa		16.58	■□□□□ 0.25
NCAPD3-213	ENST00000534532	SPATC1L	Q9H0A9	340 aa		16.58	■□□□□ 0.25
NCAPD3-213	ENST00000534532	MYMK	A6NI61	221 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	SMIM24	O75264	130 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	RALB	P11234	206 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	RFC1	P35251	1148 aa	Predicted RBP	16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	HERVK_113	P62684	666 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	ANKS3	Q6ZW76	656 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	GMCL1P1	Q8NEA9	526 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	TRIM15	Q9C019	465 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	TSPYL2	Q9H2G4	693 aa	Predicted RBP	16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	AIPL1	Q9NZN9	384 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	PLSCR1	O15162	318 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	PIGH	Q14442	188 aa	Predicted RBP	16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	ATP11C	Q8NB49	1132 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	MAD2L2	Q9UI95	211 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	CFAP99	D6REC4	459 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	P4HA2	O15460	535 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	CTIF	O43310	598 aa	Known RBP	16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	IL1R1	P14778	569 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	TBCC	Q15814	346 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	CNPY4	Q8N129	248 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	SPATA17	Q96L03	361 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	GLIS2	Q9BZE0	524 aa	Predicted RBP	16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	PCDHB2	Q9Y5E7	798 aa		16.58	■□□□□ 0.24
NCAPD3-213	ENST00000534532	OPHN1	O60890	802 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	SLC2A3	P11169	496 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	TBC1D1	Q86TI0	1168 aa	Predicted RBP	16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	MFN1	Q8IWA4	741 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	SLC7A14	Q8TBB6	771 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	DPF2	Q92785	391 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	NCLN	Q969V3	563 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532		A0A087WUV0	522 aa	Predicted RBP	16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	GRID2IP	A4D2P6	1211 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	FAM187A	A6NFU0	413 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	RASA4B	C9J798	803 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	RASA4	O43374	803 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	PDIA2	Q13087	525 aa	Known RBP	16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	PCDHB12	Q9Y5F1	795 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	MSH4	O15457	936 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	CLNS1A	P54105	237 aa	Known RBP	16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	PHEX	P78562	749 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	FSCB	Q5H9T9	825 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	ADSSL1	Q8N142	457 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	SHCBP1	Q8NEM2	672 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	FBXO41	Q8TF61	875 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	HPS3	Q969F9	1004 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	UNC45A	Q9H3U1	944 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	ANTXR2	P58335	489 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	P3H1	Q32P28	736 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	PAN2	Q504Q3	1202 aa	Known RBP	16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	DNER	Q8NFT8	737 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	TRIM17	Q9Y577	477 aa		16.57	■□□□□ 0.24
NCAPD3-213	ENST00000534532	FOXN1	O15353	648 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	MUT	P22033	750 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	RTFDC1	Q9BY42	306 aa	Predicted RBP	16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	DPP3	Q9NY33	737 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	SLC11A2	P49281	568 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	ELAVL2	Q12926	359 aa	Known RBP	16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	E2F5	Q15329	346 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	MMS22L	Q6ZRQ5	1243 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	DACT3	Q96B18	629 aa	Predicted RBP	16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	SNF8	Q96H20	258 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	KRT82	Q9NSB4	513 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	TXLNG	Q9NUQ3	528 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	PCDHGB4	Q9UN71	923 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	APOBEC2	Q9Y235	224 aa	Known RBP	16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	CFAP69	A5D8W1	941 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	HOXC6	P09630	235 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	WASHC5	Q12768	1159 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	CAPRIN1	Q14444	709 aa	Known RBP	16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	MOXD1	Q6UVY6	613 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	TXNRD3	Q86VQ6	643 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	ATP6V0D2	Q8N8Y2	350 aa		16.56	■□□□□ 0.24
NCAPD3-213	ENST00000534532	SCFD1	Q8WVM8	642 aa		16.56	■□□□□ 0.24

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms