RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 FSHRP23945 695 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 IGFBP6P24592 240 aaPredicted RBP14.61□□□□□ -0.07
CAPN1-228ENST00000534373 TKTP29401 623 aaKnown RBP14.61□□□□□ -0.07
CAPN1-228ENST00000534373 MATR3P43243 847 aaKnown RBP eCLIP14.61□□□□□ -0.07
CAPN1-228ENST00000534373 BRCC3P46736 316 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 LIG4P49917 911 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 GTF2BQ00403 316 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 CACNB1Q02641 598 aaPredicted RBP14.61□□□□□ -0.07
CAPN1-228ENST00000534373 RESTQ13127 1097 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 MRPL58Q14197 206 aaKnown RBP14.61□□□□□ -0.07
CAPN1-228ENST00000534373 DHX8Q14562 1220 aaKnown RBP14.61□□□□□ -0.07
CAPN1-228ENST00000534373 ZBTB6Q15916 424 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 CD302Q8IX05 232 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 KRI1Q8N9T8 703 aaKnown RBP14.61□□□□□ -0.07
CAPN1-228ENST00000534373 LRRC15Q8TF66 581 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 SUSD3Q96L08 255 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 MYADMQ96S97 322 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 ST6GALNAC4Q9H4F1 302 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 WNT16Q9UBV4 365 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 STK17AQ9UEE5 414 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 MAFFQ9ULX9 164 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 CLIC4Q9Y696 253 aa14.61□□□□□ -0.07
CAPN1-228ENST00000534373 CITO14578 2027 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 ANHXE9PGG2 379 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 K7ENM7 598 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 OGTO15294 1046 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 MEFVO15553 781 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-228ENST00000534373 XPOTO43592 962 aaKnown RBP14.6□□□□□ -0.07
CAPN1-228ENST00000534373 TBCAO75347 108 aaKnown RBP14.6□□□□□ -0.07
CAPN1-228ENST00000534373 ABLIM3O94929 683 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 PDIA4P13667 645 aaKnown RBP14.6□□□□□ -0.07
CAPN1-228ENST00000534373 PAX3P23760 479 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 LRPAP1P30533 357 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 TXLNAP40222 546 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 VCPP55072 806 aaKnown RBP14.6□□□□□ -0.07
CAPN1-228ENST00000534373 POU5F1Q01860 360 aaKnown RBP14.6□□□□□ -0.07
CAPN1-228ENST00000534373 VARS2Q5ST30 1063 aaKnown RBP14.6□□□□□ -0.07
CAPN1-228ENST00000534373 RSPO2Q6UXX9 243 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-228ENST00000534373 GRASPQ7Z6J2 395 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-228ENST00000534373 SLC44A3Q8N4M1 653 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 APPL2Q8NEU8 664 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 PRSS33Q8NF86 280 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 SLC7A14Q8TBB6 771 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 C18orf25Q96B23 403 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-228ENST00000534373 EPSTI1Q96J88 318 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 FIZ1Q96SL8 496 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 OXCT2Q9BYC2 517 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-228ENST00000534373 HAPLN2Q9GZV7 340 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 SMOC2Q9H3U7 446 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 FBXO2Q9UK22 296 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-228ENST00000534373 UBQLN1Q9UMX0 589 aaKnown RBP14.6□□□□□ -0.07
CAPN1-228ENST00000534373 VWA8A3KMH1 1905 aa14.6□□□□□ -0.07
CAPN1-228ENST00000534373 A0A0B4J269 797 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 I3L4J1 428 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 K7ELQ4 463 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-228ENST00000534373 PDGFBP01127 241 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-228ENST00000534373 CXCL8P10145 99 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 ATF2P15336 505 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 MARCKSP29966 332 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-228ENST00000534373 ELF1P32519 619 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 PPP2R3AQ06190 1150 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 TCF15Q12870 199 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 SLC39A14Q15043 492 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 SEZ6Q53EL9 994 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 RRAGBQ5VZM2 374 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 TPGS2Q68CL5 300 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 ASTLQ6HA08 431 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-228ENST00000534373 SLFN12LQ6IEE8 588 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 MAP4K3Q8IVH8 894 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 MFSD1Q9H3U5 465 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 ZHX3Q9H4I2 956 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 RPF1Q9H9Y2 349 aaKnown RBP14.59□□□□□ -0.07
CAPN1-228ENST00000534373 AVENQ9NQS1 362 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-228ENST00000534373 SEL1LQ9UBV2 794 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 CDH7Q9ULB5 785 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 KCNH3Q9ULD8 1083 aa14.59□□□□□ -0.07
CAPN1-228ENST00000534373 PIEZO1Q92508 2521 aa14.58□□□□□ -0.07
CAPN1-228ENST00000534373 ARHGEF37A1IGU5 675 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 CCL16O15467 120 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 STX6O43752 255 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 FAM189A1O60320 539 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 SRFP11831 508 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 MCM4P33991 863 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 ROR1Q01973 937 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 CCDC73Q6ZRK6 1079 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 USP49Q70CQ1 688 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 SV2BQ7L1I2 683 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 GET4Q7L5D6 327 aaPredicted RBP14.58□□□□□ -0.08
CAPN1-228ENST00000534373 ZNF720Q7Z2F6 126 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 TCEAL8Q8IYN2 117 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 HVCN1Q96D96 273 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 KIF12Q96FN5 646 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 FBXL21Q9UKT6 434 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 PCDHB8Q9UN66 801 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 MTMR6Q9Y217 621 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 STYXL1Q9Y6J8 313 aa14.58□□□□□ -0.08
CAPN1-228ENST00000534373 LACTBL1A8MY62 500 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 M0QZQ0 153 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 GALR2O43603 387 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-228ENST00000534373 OAZ2O95190 189 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms