RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 PPME1Q9Y570 386 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 MYO16Q9Y6X6 1858 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 I3L4J1 428 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 FOXD2O60548 495 aaPredicted RBP13.62□□□□□ -0.23
SVIP-205ENST00000533774 SEC24AO95486 1093 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 GJA1P17302 382 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 PSMC3P17980 439 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 GLRA2P23416 452 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 ARL2P36404 184 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 NLRP5P59047 1200 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 CTTNQ14247 550 aaKnown RBP13.62□□□□□ -0.23
SVIP-205ENST00000533774 MXD4Q14582 209 aaPredicted RBP13.62□□□□□ -0.23
SVIP-205ENST00000533774 TSGA10IPQ3SY00 556 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 PSAPL1Q6NUJ1 521 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 TXNDC11Q6PKC3 985 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 KBTBD6Q86V97 674 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 EXOC8Q8IYI6 725 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 HACE1Q8IYU2 909 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 HAS1Q92839 578 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 SNTG2Q9NY99 539 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 DDX25Q9UHL0 483 aaKnown RBP13.62□□□□□ -0.23
SVIP-205ENST00000533774 USP20Q9Y2K6 914 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 CITO14578 2027 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 SETXQ7Z333 2677 aaKnown RBP13.62□□□□□ -0.23
SVIP-205ENST00000533774 THADAQ6YHU6 1953 aa13.62□□□□□ -0.23
SVIP-205ENST00000533774 ADAMTS20P59510 1910 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 CCDC196A0A1B0GTZ2 297 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 RECQL4O94761 1208 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 ABLIM3O94929 683 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 EPN2O95208 641 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 THP07101 528 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 BRCC3P46736 316 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 RAP1GAPP47736 663 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 ROR1Q01973 937 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 CYP4A11Q02928 519 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 NCBP1Q09161 790 aaKnown RBP13.61□□□□□ -0.23
SVIP-205ENST00000533774 ELAVL2Q12926 359 aaKnown RBP13.61□□□□□ -0.23
SVIP-205ENST00000533774 EPHA7Q15375 998 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 INF2Q27J81 1249 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 PLA2G2CQ5R387 149 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 TCEAL6Q6IPX3 200 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 PKN3Q6P5Z2 889 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 PDXDC1Q6P996 788 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 MOXD1Q6UVY6 613 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 Q6ZUG5 572 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 RTL10Q7L3V2 364 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 WDR5BQ86VZ2 330 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 C12orf50Q8NA57 414 aaPredicted RBP13.61□□□□□ -0.23
SVIP-205ENST00000533774 C3orf58Q8NDZ4 430 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 SMARCD2Q92925 531 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 BRF1Q92994 677 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 TCEAL3Q969E4 200 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 RNF26Q9BY78 433 aaPredicted RBP13.61□□□□□ -0.23
SVIP-205ENST00000533774 NCOA5Q9HCD5 579 aaKnown RBP13.61□□□□□ -0.23
SVIP-205ENST00000533774 PCDHA4Q9UN74 947 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 BACE2Q9Y5Z0 518 aa13.61□□□□□ -0.23
SVIP-205ENST00000533774 DENND4CQ5VZ89 1909 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 KIAA1549LQ6ZVL6 1849 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 ZNF638Q14966 1978 aaKnown RBP13.6□□□□□ -0.23
SVIP-205ENST00000533774 A0A087WWV3 80 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 SRRM3A6NNA2 597 aaPredicted RBP13.6□□□□□ -0.23
SVIP-205ENST00000533774 SLC38A8A6NNN8 435 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 EDN1P05305 212 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 PXNP49023 591 aaPredicted RBP13.6□□□□□ -0.23
SVIP-205ENST00000533774 SPIRE1Q08AE8 756 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 TFDP1Q14186 410 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 GPIHBP1Q8IV16 184 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 MFSD6LQ8IWD5 586 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 AIFM3Q96NN9 605 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 NFKBIZQ9BYH8 718 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 SLKQ9H2G2 1235 aaPredicted RBP13.6□□□□□ -0.23
SVIP-205ENST00000533774 PDZD7Q9H5P4 517 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 GOLGA2P5Q9HBQ8 144 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 SH3GLB2Q9NR46 395 aa13.6□□□□□ -0.23
SVIP-205ENST00000533774 GCN1Q92616 2671 aaKnown RBP13.59□□□□□ -0.23
SVIP-205ENST00000533774 ANK1P16157 1881 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 HEPACAM2A8MVW5 462 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 TMEM189-UBE2V1I3L0A0 370 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 ZNF263O14978 683 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 TBX3O15119 743 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 EXTL3O43909 919 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 DKC1O60832 514 aaKnown RBP eCLIP13.59□□□□□ -0.23
SVIP-205ENST00000533774 MICAL2O94851 1124 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 SLITRK3O94933 977 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 LRG1P02750 347 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 IFNAR1P17181 557 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 HOXA6P31267 233 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 PI4KAP42356 2102 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 CLCNKBP51801 687 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 AKAP17AQ02040 695 aaKnown RBP13.59□□□□□ -0.23
SVIP-205ENST00000533774 RNF20Q5VTR2 975 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 SLC8B1Q6J4K2 584 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 LRSAM1Q6UWE0 723 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 OTUD6AQ7L8S5 288 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 NOSTRINQ8IVI9 506 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 BLIDQ8IZY5 108 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 ZNF461Q8TAF7 563 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 TTC8Q8TAM2 541 aa13.59□□□□□ -0.23
SVIP-205ENST00000533774 ZSCAN18Q8TBC5 510 aaPredicted RBP13.59□□□□□ -0.23
SVIP-205ENST00000533774 GATA6Q92908 595 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms