RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 I3L4J1 428 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 STK25O00506 426 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 SYN3O14994 580 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 CCL16O15467 120 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 KRT18P05783 430 aaKnown RBP13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 POU2F2P09086 479 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 CLTAP09496 248 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 SRFP11831 508 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 ELF1P32519 619 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 ABCD1P33897 745 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 BRCC3P46736 316 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 NCKAP1LP55160 1127 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 DHX8Q14562 1220 aaKnown RBP13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 SF3A1Q15459 793 aaKnown RBP13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 SLC10A6Q3KNW5 377 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 RSPO2Q6UXX9 243 aaPredicted RBP13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 HAUS6Q7Z4H7 955 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 GPBP1Q86WP2 473 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 MYCT1Q8N699 235 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 C3orf58Q8NDZ4 430 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 KCNN1Q92952 543 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 RTP3Q9BQQ7 232 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 PARVGQ9HBI0 331 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 CDH7Q9ULB5 785 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 DOCK8Q8NF50 2099 aa13.55□□□□□ -0.24
CAPRIN1-213ENST00000533562 MYO15AQ9UKN7 3530 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 VPS37CA5D8V6 355 aaPredicted RBP13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 NARSO43776 548 aaKnown RBP13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 FAM13AO94988 1023 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 CFHP08603 1231 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 AOC1P19801 751 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 MARCKSP29966 332 aaPredicted RBP13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 DDIT3P35638 169 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 LIG4P49917 911 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 CUL4AQ13619 759 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 VARS2Q5ST30 1063 aaKnown RBP13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 SLC8B1Q6J4K2 584 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 APPL2Q8NEU8 664 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 C18orf25Q96B23 403 aaPredicted RBP13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 REEP2Q9BRK0 252 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 KCNH3Q9ULD8 1083 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 TBX20Q9UMR3 447 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 KMT2EQ8IZD2 1858 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 VWA8A3KMH1 1905 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 CITO14578 2027 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 DOCK6Q96HP0 2047 aa13.54□□□□□ -0.24
CAPRIN1-213ENST00000533562 PRRG1O14668 218 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 HNRNPDLO14979 420 aaKnown RBP13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 TRAK2O60296 914 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 ABLIM3O94929 683 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 ATF2P15336 505 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 NPR3P17342 541 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 PLCG1P19174 1290 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 RFX1P22670 979 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 MCM4P33991 863 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 NTHL1P78549 312 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 HTR4Q13639 388 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 KARSQ15046 597 aaKnown RBP13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 PABPC1LQ4VXU2 614 aaKnown RBP13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 SEZ6Q53EL9 994 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 MTSS1LQ765P7 747 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 RAD54LQ92698 747 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 FGF13Q92913 245 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 SUSD3Q96L08 255 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 TSPAN18Q96SJ8 248 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 PHOX2BQ99453 314 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 ZHX3Q9H4I2 956 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 BLOC1S4Q9NUP1 217 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 NUMBLQ9Y6R0 609 aa13.53□□□□□ -0.24
CAPRIN1-213ENST00000533562 TTC26A0AVF1 554 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 K7ENM7 598 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 XPOTO43592 962 aaKnown RBP13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 PI15O43692 258 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 TBC1D4O60343 1298 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 TBCAO75347 108 aaKnown RBP13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 LRG1P02750 347 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 CXCL8P10145 99 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 PTPN2P17706 415 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 CYP3A5P20815 502 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 ZNF131P52739 623 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 ARPP19P56211 112 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 ROR1Q01973 937 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 PPP2R3AQ06190 1150 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 MRPL58Q14197 206 aaKnown RBP13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 MCM6Q14566 821 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 CTXN3Q4LDR2 81 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 TPGS2Q68CL5 300 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 KRI1Q8N9T8 703 aaKnown RBP13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 LARP4BQ92615 738 aaKnown RBP13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 KIF12Q96FN5 646 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 CCSER1Q9C0I3 900 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 RPF1Q9H9Y2 349 aaKnown RBP13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 SLC2A4RGQ9NR83 387 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 DNMT3BQ9UBC3 853 aaKnown RBP13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 CCDC39Q9UFE4 941 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 MAFFQ9ULX9 164 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 CFAP54Q96N23 3096 aa13.52□□□□□ -0.25
CAPRIN1-213ENST00000533562 ARHGEF37A1IGU5 675 aa13.51□□□□□ -0.25
CAPRIN1-213ENST00000533562 WDR27A2RRH5 827 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms