RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 ZNF677Q86XU0 584 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 ANKLE1Q8NAG6 615 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 CCDC77Q9BR77 488 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 BATF3Q9NR55 127 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 DNAJC17Q9NVM6 304 aaKnown RBP17.69■□□□□ 0.42
CTSB-228ENST00000533455 PKD2L1Q9P0L9 805 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 TBX20Q9UMR3 447 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 UBIAD1Q9Y5Z9 338 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 FOXO6A8MYZ6 492 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 PSTPIP1O43586 416 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 ZC3H11AO75152 810 aaKnown RBP eCLIP17.69■□□□□ 0.42
CTSB-228ENST00000533455 RPSAP08865 295 aaKnown RBP17.69■□□□□ 0.42
CTSB-228ENST00000533455 C4orf19Q8IY42 314 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 CCDC89Q8N998 374 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 TMEM161BQ8NDZ6 487 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 CCDC127Q96BQ5 260 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 SAAL1Q96ER3 474 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 TOPORSQ9NS56 1045 aaPredicted RBP17.69■□□□□ 0.42
CTSB-228ENST00000533455 FEM1BQ9UK73 627 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 ZBTB21Q9ULJ3 1066 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 ASTN2O75129 1339 aaPredicted RBP17.69■□□□□ 0.42
CTSB-228ENST00000533455 MYPNQ86TC9 1320 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 MAGEB2O15479 319 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 ONECUT3O60422 494 aaPredicted RBP17.68■□□□□ 0.42
CTSB-228ENST00000533455 PROSCO94903 275 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 RRM1P23921 792 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 SPP2Q13103 211 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 TKFCQ3LXA3 575 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 TMEM63BQ5T3F8 832 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 USP37Q86T82 979 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 ECHDC2Q86YB7 292 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 ANKRD35Q8N283 1001 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 LARGE2Q8N3Y3 721 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 KIF2BQ8N4N8 673 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 MAML1Q92585 1016 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 GPRC5CQ9NQ84 441 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 UMODL1Q5DID0 1318 aa17.68■□□□□ 0.42
CTSB-228ENST00000533455 UNC5CO95185 931 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 CNGA1P29973 690 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 FOXN2P32314 431 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 LACTBP83111 547 aaPredicted RBP17.67■□□□□ 0.42
CTSB-228ENST00000533455 IL9RQ01113 521 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 GHRHRQ02643 423 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 CYP24A1Q07973 514 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 NR1H3Q13133 447 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 IZUMO3Q5VZ72 239 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 ZNF365Q70YC5 407 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 SRRM1Q8IYB3 904 aaKnown RBP17.67■□□□□ 0.42
CTSB-228ENST00000533455 IL31RAQ8NI17 732 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 PRCCQ92733 491 aaPredicted RBP17.67■□□□□ 0.42
CTSB-228ENST00000533455 PRMT6Q96LA8 375 aaPredicted RBP17.67■□□□□ 0.42
CTSB-228ENST00000533455 PWWP2AQ96N64 755 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 COL20A1Q9P218 1284 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 WDR81Q562E7 1941 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 FAM47DPA6NHR8 397 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 RALAP11233 206 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 KRT5P13647 590 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 KLRC2P26717 231 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 SLC18A1P54219 525 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 UGCGQ16739 394 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 SV2AQ7L0J3 742 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 KATNAL2Q8IYT4 538 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 ZCCHC9Q8N567 271 aaKnown RBP17.67■□□□□ 0.42
CTSB-228ENST00000533455 FBF1Q8TES7 1133 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 CNKSR1Q969H4 720 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 UBN1Q9NPG3 1134 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 TXLNGQ9NUQ3 528 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 PSME4Q14997 1843 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 ARID2Q68CP9 1835 aa17.67■□□□□ 0.42
CTSB-228ENST00000533455 A8MUI8 341 aa17.66■□□□□ 0.42
CTSB-228ENST00000533455 CYP1A1P04798 512 aaPredicted RBP17.66■□□□□ 0.42
CTSB-228ENST00000533455 CCNG1P51959 295 aa17.66■□□□□ 0.42
CTSB-228ENST00000533455 WDR4P57081 412 aaKnown RBP17.66■□□□□ 0.42
CTSB-228ENST00000533455 LMNB2Q03252 620 aa17.66■□□□□ 0.42
CTSB-228ENST00000533455 PCNX4Q63HM2 1172 aa17.66■□□□□ 0.42
CTSB-228ENST00000533455 RGS9BPQ6ZS82 235 aa17.66■□□□□ 0.42
CTSB-228ENST00000533455 TDRPQ86YL5 185 aa17.66■□□□□ 0.42
CTSB-228ENST00000533455 RAB3IPQ96QF0 476 aaPredicted RBP17.66■□□□□ 0.42
CTSB-228ENST00000533455 ANKEF1Q9NU02 776 aa17.66■□□□□ 0.42
CTSB-228ENST00000533455 TBC1D22BQ9NU19 505 aa17.66■□□□□ 0.42
CTSB-228ENST00000533455 ADAM22Q9P0K1 906 aa17.66■□□□□ 0.42
CTSB-228ENST00000533455 TBK1Q9UHD2 729 aa17.66■□□□□ 0.42
CTSB-228ENST00000533455 STARD13Q9Y3M8 1113 aa17.66■□□□□ 0.42
CTSB-228ENST00000533455 ATP5HO75947 161 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 ASMTLO95671 621 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 ICAM1P05362 532 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 VPS41P49754 854 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 ATP11AP98196 1134 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 NAA25Q14CX7 972 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 AOC3Q16853 763 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 FAM102BQ5T8I3 360 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 SLC39A4Q6P5W5 647 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 MON1BQ7L1V2 547 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 TRABD2AQ86V40 505 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 RHOT1Q8IXI2 618 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 THOC1Q96FV9 657 aaKnown RBP17.65■□□□□ 0.42
CTSB-228ENST00000533455 PITPNM3Q9BZ71 974 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 PCDHB2Q9Y5E7 798 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 TMEM150BA6NC51 233 aa17.65■□□□□ 0.42
CTSB-228ENST00000533455 RASA4BC9J798 803 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms