RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 SLC39A2Q9NP94 309 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 DERAQ9Y315 318 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 GRXCR2A6NFK2 248 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 KIAA0391O15091 583 aaKnown RBP22.23■■□□□ 1.15
CCS-208ENST00000533244 TGFB1I1O43294 461 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 LDHAP00338 332 aaKnown RBP22.23■■□□□ 1.15
CCS-208ENST00000533244 DPYDQ12882 1025 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 PSMD2Q13200 908 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 SNW1Q13573 536 aaKnown RBP22.23■■□□□ 1.15
CCS-208ENST00000533244 PTCRAQ6ISU1 281 aaPredicted RBP22.23■■□□□ 1.15
CCS-208ENST00000533244 SMRP1Q8NCR6 262 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 KIAA0895Q8NCT3 520 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 ZSWIM2Q8NEG5 633 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 CASP10Q92851 521 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.23■■□□□ 1.152e-6■■□□□ 14.5
CCS-208ENST00000533244 FNIP2Q9P278 1114 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 CD207Q9UJ71 328 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 GOLGA6L4A6NEF3 574 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 C2CD2LO14523 706 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 TEX28O15482 410 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 SRGAP2BP0DMP2 458 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 FGFR3P22607 806 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 STK4Q13043 487 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 FAM171A1Q5VUB5 890 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 SPATA1Q5VX52 437 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 JADE1Q6IE81 842 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 KIAA1841Q6NSI8 718 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 ANKRD54Q6NXT1 300 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 LLGL2Q6P1M3 1020 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 ARMCX5Q6P1M9 558 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.22■■□□□ 1.15
CCS-208ENST00000533244 PPFIBP1Q86W92 1011 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 BRSK2Q8IWQ3 736 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 PIK3R5Q8WYR1 880 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 SAAL1Q96ER3 474 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 TTPALQ9BTX7 342 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 COL25A1Q9BXS0 654 aaPredicted RBP22.22■■□□□ 1.15
CCS-208ENST00000533244 EXOC1Q9NV70 894 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 C2CD2Q9Y426 696 aa22.22■■□□□ 1.15
CCS-208ENST00000533244 CUL9Q8IWT3 2517 aa22.21■■□□□ 1.15
CCS-208ENST00000533244 MBTPS2O43462 519 aa22.21■■□□□ 1.15
CCS-208ENST00000533244 XPOTO43592 962 aaKnown RBP22.21■■□□□ 1.15
CCS-208ENST00000533244 EXTL3O43909 919 aa22.21■■□□□ 1.15
CCS-208ENST00000533244 RPN1P04843 607 aaKnown RBP22.21■■□□□ 1.15
CCS-208ENST00000533244 NFICP08651 508 aa22.21■■□□□ 1.15
CCS-208ENST00000533244 CLCN4P51793 760 aa22.21■■□□□ 1.15
CCS-208ENST00000533244 SNRPFP62306 86 aaKnown RBP22.21■■□□□ 1.15
CCS-208ENST00000533244 FAM160A1Q05DH4 1040 aa22.21■■□□□ 1.15
CCS-208ENST00000533244 SMAD4Q13485 552 aaKnown RBP22.21■■□□□ 1.15
CCS-208ENST00000533244 TMEM130Q8N3G9 435 aa22.21■■□□□ 1.15
CCS-208ENST00000533244 RIN2Q8WYP3 895 aaPredicted RBP22.21■■□□□ 1.15
CCS-208ENST00000533244 FAM213AQ9BRX8 229 aa22.21■■□□□ 1.15
CCS-208ENST00000533244 AGPAT3Q9NRZ7 376 aa22.21■■□□□ 1.15
CCS-208ENST00000533244 TCF20Q9UGU0 1960 aaKnown RBP22.2■■□□□ 1.14
CCS-208ENST00000533244 TRAPPC3O43617 180 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 RHOBTB3O94955 611 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 IL18RAPO95256 599 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 C1RP00736 705 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 ADH1AP07327 375 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 IL9P15248 144 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 EPCAMP16422 314 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 HOXB8P17481 243 aaPredicted RBP22.2■■□□□ 1.14
CCS-208ENST00000533244 BRCC3P46736 316 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 CREMQ03060 361 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 CLUL1Q15846 466 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 KANK3Q6NY19 840 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 SYCE2Q6PIF2 218 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 TMEM87AQ8NBN3 555 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 LNX1Q8TBB1 728 aaPredicted RBP22.2■■□□□ 1.14
CCS-208ENST00000533244 ADAMTS19Q8TE59 1207 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 FAM212AQ96EL1 285 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 PCIF1Q9H4Z3 704 aa22.2■■□□□ 1.14
CCS-208ENST00000533244 NCOR1O75376 2440 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 KLRC2P26717 231 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 WNT7BP56706 349 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 TMEM132DQ14C87 1099 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 SMAD2Q15796 467 aaKnown RBP22.19■■□□□ 1.14
CCS-208ENST00000533244 KNOP1Q1ED39 458 aaKnown RBP22.19■■□□□ 1.14
CCS-208ENST00000533244 NT5DC4Q86YG4 428 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 NELFCDQ8IXH7 590 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 C12orf56Q8IXR9 622 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 EFCAB13Q8IY85 973 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 GPD1LQ8N335 351 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 BEST2Q8NFU1 509 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 FBXL18Q96ME1 805 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 S1PR5Q9H228 398 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 DZANK1Q9NVP4 752 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 PLXNA3P51805 1871 aa22.19■■□□□ 1.14
CCS-208ENST00000533244 GOLGA8IPA6NC78 632 aa22.18■■□□□ 1.14
CCS-208ENST00000533244 GOLGA8JA6NMD2 632 aa22.18■■□□□ 1.14
CCS-208ENST00000533244 I3L4J1 428 aa22.18■■□□□ 1.14
CCS-208ENST00000533244 AARSP49588 968 aaKnown RBP eCLIP22.18■■□□□ 1.14
CCS-208ENST00000533244 GUCY2FP51841 1108 aa22.18■■□□□ 1.14
CCS-208ENST00000533244 KCNB1Q14721 858 aa22.18■■□□□ 1.14
CCS-208ENST00000533244 PDXDC1Q6P996 788 aa22.18■■□□□ 1.14
CCS-208ENST00000533244 PRSS55Q6UWB4 352 aaPredicted RBP22.18■■□□□ 1.14
CCS-208ENST00000533244 SUSD3Q96L08 255 aa22.18■■□□□ 1.14
CCS-208ENST00000533244 TIGD1Q96MW7 591 aa22.18■■□□□ 1.14
CCS-208ENST00000533244 RBAKQ9NYW8 714 aaPredicted RBP22.18■■□□□ 1.14
CCS-208ENST00000533244 HSPBP1Q9NZL4 362 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms