RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 CACNA1AO00555 2505 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 ANHXE9PGG2 379 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 KIF2AO00139 706 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-207ENST00000533242 STX10O60499 249 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 PSMD10O75832 226 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 EFEMP2O95967 443 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 PRCPP42785 496 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 GLUD2P49448 558 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 KRT31Q15323 416 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 KIAA0319Q5VV43 1072 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 RRAGBQ5VZM2 374 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 C1orf210Q8IVY1 113 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 IGSF22Q8N9C0 903 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 CCDC148Q8NFR7 591 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 EEF2KMTQ96G04 330 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 UBN1Q9NPG3 1134 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 ARHGEF3Q9NR81 526 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 MARCH5Q9NX47 278 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 DLL3Q9NYJ7 618 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 PHLPP2Q6ZVD8 1323 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 TEX28O15482 410 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 Q4G0T1 1027 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 UBXN11Q5T124 520 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 DCLRE1AQ6PJP8 1040 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 B3GNT9Q6UX72 402 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 SRGAP1Q7Z6B7 1085 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 IRF2BP1Q8IU81 584 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 GPR65Q8IYL9 337 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 GPR152Q8TDT2 470 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 ZNF707Q96C28 371 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-207ENST00000533242 NLRP4Q96MN2 994 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 HINFPQ9BQA5 517 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 PLEKHA4Q9H4M7 779 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 IFT122Q9HBG6 1241 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 ZDHHC7Q9NXF8 308 aa8.99□□□□□ -0.97
NEDD8-207ENST00000533242 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.99□□□□□ -0.97
NEDD8-207ENST00000533242 ZFP37Q9Y6Q3 630 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-207ENST00000533242 GVINP1Q7Z2Y8 2422 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 TMEM150BA6NC51 233 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 C2CD2LO14523 706 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 NRDCO43847 1150 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 KLRC4O43908 158 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 URI1O94763 535 aaPredicted RBP8.98□□□□□ -0.97
NEDD8-207ENST00000533242 RPN1P04843 607 aaKnown RBP8.98□□□□□ -0.97
NEDD8-207ENST00000533242 DCNP07585 359 aaKnown RBP8.98□□□□□ -0.97
NEDD8-207ENST00000533242 LAMP2P13473 410 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 CASP14P31944 242 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 STARD6P59095 220 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 DSG1Q02413 1049 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 HTR4Q13639 388 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 ARL6IP4Q66PJ3 421 aaKnown RBP8.98□□□□□ -0.97
NEDD8-207ENST00000533242 TAS1R1Q7RTX1 841 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 KSR1Q8IVT5 923 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 COLGALT2Q8IYK4 626 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 NT5C3AQ9H0P0 336 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 VPS16Q9H269 839 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 PIDD1Q9HB75 910 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 SH3GLB2Q9NR46 395 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 TAB2Q9NYJ8 693 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 CGNQ9P2M7 1197 aaKnown RBP8.98□□□□□ -0.97
NEDD8-207ENST00000533242 PPME1Q9Y570 386 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 CCDC194A0A1B0GVG4 234 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 AKR1B15C9JRZ8 316 aaPredicted RBP8.98□□□□□ -0.97
NEDD8-207ENST00000533242 MFAP3LO75121 409 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 POMCP01189 267 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 ITGA4P13612 1032 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 LONP1P36776 959 aaKnown RBP8.98□□□□□ -0.97
NEDD8-207ENST00000533242 STAT6P42226 847 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 AFF1P51825 1210 aaKnown RBP8.98□□□□□ -0.97
NEDD8-207ENST00000533242 PSMC5P62195 406 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 ZNF528Q3MIS6 628 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 EXOC8Q8IYI6 725 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 SUMF1Q8NBK3 374 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 PJA1Q8NG27 643 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 NELFBQ8WX92 580 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 SHDQ96IW2 340 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 CARD6Q9BX69 1037 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.98□□□□□ -0.97
NEDD8-207ENST00000533242 COL4A3BPQ9Y5P4 624 aa8.98□□□□□ -0.97
NEDD8-207ENST00000533242 CYP3A7-CYP3A51PA0A087WV96 503 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 RFPL2O75678 378 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 H2AFXP16104 143 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-207ENST00000533242 SDHBP21912 280 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 CYP3A7P24462 503 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 OR1G1P47890 313 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 GNG11P61952 73 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 CREMQ03060 361 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 DSC1Q08554 894 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 PAK1Q13153 545 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 DHX8Q14562 1220 aaKnown RBP8.97□□□□□ -0.97
NEDD8-207ENST00000533242 RSPO4Q2I0M5 234 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-207ENST00000533242 ZNF658Q5TYW1 1059 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-207ENST00000533242 ANO5Q75V66 913 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 CREBRFQ8IUR6 639 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 GPR161Q8N6U8 529 aaKnown RBP8.97□□□□□ -0.97
NEDD8-207ENST00000533242 DAGLBQ8NCG7 672 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 ZNF397Q8NF99 534 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-207ENST00000533242 GJA10Q969M2 543 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 CCDC51Q96ER9 411 aa8.97□□□□□ -0.97
NEDD8-207ENST00000533242 COLEC11Q9BWP8 271 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms