RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 NCBP1Q09161 790 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 SRSF5Q13243 272 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 ORC2Q13416 577 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 PCBP1Q15365 356 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 SF3A2Q15428 464 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 RTP2Q5QGT7 225 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 TANGO2Q6ICL3 276 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 PPP4R3AQ6IN85 833 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 PSAPL1Q6NUJ1 521 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 PDXDC1Q6P996 788 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 EXOC8Q8IYI6 725 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 FSIP1Q8NA03 581 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 SLC7A14Q8TBB6 771 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 ING5Q8WYH8 240 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 PIK3R5Q8WYR1 880 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 CCDC51Q96ER9 411 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 MCRS1Q96EZ8 462 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 CLSTN3Q9BQT9 956 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 TTPALQ9BTX7 342 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 ARRDC1-AS1Q9H2J1 176 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 HCFC1R1Q9NWW0 138 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 MIOSQ9NXC5 875 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 LHX6Q9UPM6 363 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 GIT1Q9Y2X7 761 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 COL4A3BPQ9Y5P4 624 aa12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 FASNP49327 2511 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-213ENST00000533149 CYP3A7-CYP3A51PA0A087WV96 503 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 SRRM3A6NNA2 597 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 NEMFO60524 1076 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 SRGAP2CP0DJJ0 459 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 CHRNB1P11230 501 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 GCFC2P16383 781 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 CYP3A7P24462 503 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 AXLP30530 894 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 HOXA6P31267 233 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 GRIN1Q05586 938 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 RING1Q06587 406 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 LRRC32Q14392 662 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 PSMD5Q16401 504 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 IL17AQ16552 155 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 ARL6IP4Q66PJ3 421 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 C1orf228Q6PIY5 440 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 LENG9Q96B70 501 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 ZFP42Q96MM3 310 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 TEKT3Q9BXF9 490 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 ZFP14Q9HCL3 533 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 AVENQ9NQS1 362 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 PIAS3Q9Y6X2 628 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 CNOT1A5YKK6 2376 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 DOCK6Q96HP0 2047 aa12.44□□□□□ -0.42
TRAPPC4-213ENST00000533149 A0A1B0GVL5 298 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 TMEM150BA6NC51 233 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 K7ESF4 209 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 LAD1O00515 517 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 AXIN1O15169 862 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 MSH4O15457 936 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 STBD1O95210 358 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 OR52Z1P0C646 297 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 MLLT6P55198 1093 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 GRIK3Q13003 919 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 HSP90AA2PQ14568 343 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 LRCH2Q5VUJ6 765 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 HEATR6Q6AI08 1181 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 NOTUMQ6P988 496 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 SHC4Q6S5L8 630 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 MOXD1Q6UVY6 613 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 DTHD1Q6ZMT9 781 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 MIER3Q7Z3K6 550 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 CEP57Q86XR8 500 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 LNX1Q8TBB1 728 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 PSPC1Q8WXF1 523 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 SLC7A3Q8WY07 619 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 SLC5A5Q92911 643 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 MSANTD3Q96H12 275 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 MTMR9Q96QG7 549 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 SH2D3AQ9BRG2 576 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 ADAM33Q9BZ11 813 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 CSRNP2Q9H175 543 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 UNC45AQ9H3U1 944 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 GOLPH3LQ9H4A5 285 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 MINDY3Q9H8M7 445 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 ZNF334Q9HCZ1 680 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 RXFP3Q9NSD7 469 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 DDX25Q9UHL0 483 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 WDR81Q562E7 1941 aa12.43□□□□□ -0.42
TRAPPC4-213ENST00000533149 VWA3AA6NCI4 1184 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 SLC37A4O43826 429 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 EPN2O95208 641 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 RHOP08100 348 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 PSMC3P17980 439 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 PRPHP41219 470 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 NOVA1P51513 510 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 ELAVL2Q12926 359 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 FOXC1Q12948 553 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 RAB33AQ14088 237 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 GRM2Q14416 872 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 CALCRLQ16602 461 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 Q4G0T1 1027 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 FAM171A1Q5VUB5 890 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms