RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 DCLRE1AQ6PJP8 1040 aa24.12■■□□□ 1.45
LRRK1-208ENST00000532029 USP37Q86T82 979 aa24.12■■□□□ 1.45
LRRK1-208ENST00000532029 TMEM173Q86WV6 379 aaPredicted RBP24.12■■□□□ 1.45
LRRK1-208ENST00000532029 ZC3H3Q8IXZ2 948 aaKnown RBP24.12■■□□□ 1.45
LRRK1-208ENST00000532029 EEF2KMTQ96G04 330 aa24.12■■□□□ 1.45
LRRK1-208ENST00000532029 ANKRD36BP1Q96IX9 119 aa24.12■■□□□ 1.45
LRRK1-208ENST00000532029 CGRRF1Q99675 332 aa24.12■■□□□ 1.45
LRRK1-208ENST00000532029 MKNK1Q9BUB5 465 aa24.12■■□□□ 1.45
LRRK1-208ENST00000532029 MARCH5Q9NX47 278 aa24.12■■□□□ 1.45
LRRK1-208ENST00000532029 PDCD11Q14690 1871 aaKnown RBP24.11■■□□□ 1.45
LRRK1-208ENST00000532029 TRIP11Q15643 1979 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 GRM6O15303 877 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 B3GAT3O94766 335 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 TNNC2P02585 160 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 TNNI1P19237 187 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 LRPAP1P30533 357 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 GUCY2FP51841 1108 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 STX1AQ16623 288 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 UPP1Q16831 310 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 INTS8Q75QN2 995 aaKnown RBP24.11■■□□□ 1.45
LRRK1-208ENST00000532029 WDR49Q8IV35 697 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 CSGALNACT2Q8N6G5 542 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 SPPL3Q8TCT6 385 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 BCL7CQ8WUZ0 217 aaPredicted RBP24.11■■□□□ 1.45
LRRK1-208ENST00000532029 POF1BQ8WVV4 589 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 CEP63Q96MT8 703 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 GAS2L1Q99501 681 aaPredicted RBP24.11■■□□□ 1.45
LRRK1-208ENST00000532029 LMAN2LQ9H0V9 348 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 INTS13Q9NVM9 706 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 DPP3Q9NY33 737 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 STK39Q9UEW8 545 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 ADAM28Q9UKQ2 775 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 LZTS1Q9Y250 596 aa24.11■■□□□ 1.45
LRRK1-208ENST00000532029 SLC16A3O15427 465 aaKnown RBP24.1■■□□□ 1.45
LRRK1-208ENST00000532029 KIF4AO95239 1232 aa24.1■■□□□ 1.45
LRRK1-208ENST00000532029 FGFR1OPO95684 399 aaKnown RBP24.1■■□□□ 1.45
LRRK1-208ENST00000532029 ERCC5P28715 1186 aaPredicted RBP24.1■■□□□ 1.45
LRRK1-208ENST00000532029 PTPROQ16827 1216 aa24.1■■□□□ 1.45
LRRK1-208ENST00000532029 DUOXA2Q1HG44 320 aa24.1■■□□□ 1.45
LRRK1-208ENST00000532029 CT47A1Q5JQC4 288 aaPredicted RBP24.1■■□□□ 1.45
LRRK1-208ENST00000532029 LMBRD2Q68DH5 695 aaPredicted RBP24.1■■□□□ 1.45
LRRK1-208ENST00000532029 DDX53Q86TM3 631 aaKnown RBP24.1■■□□□ 1.45
LRRK1-208ENST00000532029 TMC2Q8TDI7 906 aa24.1■■□□□ 1.45
LRRK1-208ENST00000532029 HASPINQ8TF76 798 aa24.1■■□□□ 1.45
LRRK1-208ENST00000532029 DUSP9Q99956 384 aaKnown RBP24.1■■□□□ 1.45
LRRK1-208ENST00000532029 ANK1P16157 1881 aa24.09■■□□□ 1.45
LRRK1-208ENST00000532029 F8W810 466 aa24.09■■□□□ 1.45
LRRK1-208ENST00000532029 TMEM189-UBE2V1I3L0A0 370 aa24.09■■□□□ 1.45
LRRK1-208ENST00000532029 TPD52L1Q16890 204 aaPredicted RBP24.09■■□□□ 1.45
LRRK1-208ENST00000532029 PARD3BQ8TEW8 1205 aa24.09■■□□□ 1.45
LRRK1-208ENST00000532029 MTMR12Q9C0I1 747 aa24.09■■□□□ 1.45
LRRK1-208ENST00000532029 R3HCC1Q9Y3T6 440 aaKnown RBP24.09■■□□□ 1.45
LRRK1-208ENST00000532029 NUB1Q9Y5A7 615 aa24.09■■□□□ 1.45
LRRK1-208ENST00000532029 SF3B1O75533 1304 aaKnown RBP eCLIP24.09■■□□□ 1.45
LRRK1-208ENST00000532029 COL4A4P53420 1690 aaPredicted RBP24.08■■□□□ 1.45
LRRK1-208ENST00000532029 LPXNO60711 386 aa24.08■■□□□ 1.45
LRRK1-208ENST00000532029 VAMP7P51809 220 aa24.08■■□□□ 1.45
LRRK1-208ENST00000532029 TYRO3Q06418 890 aa24.08■■□□□ 1.45
LRRK1-208ENST00000532029 BMS1Q14692 1282 aaKnown RBP24.08■■□□□ 1.45
LRRK1-208ENST00000532029 C9orf57Q5W0N0 161 aa24.08■■□□□ 1.45
LRRK1-208ENST00000532029 FUT10Q6P4F1 479 aa24.08■■□□□ 1.45
LRRK1-208ENST00000532029 FILIP1Q7Z7B0 1213 aa24.08■■□□□ 1.45
LRRK1-208ENST00000532029 OR5B17Q8NGF7 314 aa24.08■■□□□ 1.45
LRRK1-208ENST00000532029 PLEKHO2Q8TD55 490 aa24.08■■□□□ 1.45
LRRK1-208ENST00000532029 POP1Q99575 1024 aaKnown RBP24.08■■□□□ 1.45
LRRK1-208ENST00000532029 CDX2Q99626 313 aaPredicted RBP24.08■■□□□ 1.45
LRRK1-208ENST00000532029 TLR9Q9NR96 1032 aa24.08■■□□□ 1.45
LRRK1-208ENST00000532029 MTMR10Q9NXD2 777 aa24.08■■□□□ 1.45
LRRK1-208ENST00000532029 ITGA11Q9UKX5 1188 aa24.08■■□□□ 1.45
LRRK1-208ENST00000532029 PTPRJQ12913 1337 aa24.08■■□□□ 1.44
LRRK1-208ENST00000532029 LRRIQ3A6PVS8 624 aaPredicted RBP24.07■■□□□ 1.44
LRRK1-208ENST00000532029 TRAPPC3O43617 180 aa24.07■■□□□ 1.44
LRRK1-208ENST00000532029 CSPG5O95196 566 aa24.07■■□□□ 1.44
LRRK1-208ENST00000532029 IGFBP4P22692 258 aa24.07■■□□□ 1.44
LRRK1-208ENST00000532029 AP3M2P53677 418 aa24.07■■□□□ 1.44
LRRK1-208ENST00000532029 ELAVL2Q12926 359 aaKnown RBP24.07■■□□□ 1.44
LRRK1-208ENST00000532029 BFSP1Q12934 665 aa24.07■■□□□ 1.44
LRRK1-208ENST00000532029 CCDC40Q4G0X9 1142 aa24.07■■□□□ 1.44
LRRK1-208ENST00000532029 VPS52Q8N1B4 723 aa24.07■■□□□ 1.44
LRRK1-208ENST00000532029 TMEM130Q8N3G9 435 aa24.07■■□□□ 1.44
LRRK1-208ENST00000532029 C1orf127Q8N9H9 656 aa24.07■■□□□ 1.44
LRRK1-208ENST00000532029 MYLIPQ8WY64 445 aa24.07■■□□□ 1.44
LRRK1-208ENST00000532029 FAM84AQ96KN4 292 aa24.07■■□□□ 1.44
LRRK1-208ENST00000532029 SRRTQ9BXP5 876 aaKnown RBP24.07■■□□□ 1.44
LRRK1-208ENST00000532029 GNA14O95837 355 aa24.06■■□□□ 1.44
LRRK1-208ENST00000532029 ITGB3P05106 788 aa24.06■■□□□ 1.44
LRRK1-208ENST00000532029 KRT19P08727 400 aa24.06■■□□□ 1.44
LRRK1-208ENST00000532029 DNAJB1P25685 340 aa24.06■■□□□ 1.44
LRRK1-208ENST00000532029 ENPEPQ07075 957 aa24.06■■□□□ 1.44
LRRK1-208ENST00000532029 TMC7Q7Z402 723 aa24.06■■□□□ 1.44
LRRK1-208ENST00000532029 C3orf58Q8NDZ4 430 aa24.06■■□□□ 1.44
LRRK1-208ENST00000532029 MICAL1Q8TDZ2 1067 aa24.06■■□□□ 1.44
LRRK1-208ENST00000532029 MRPL38Q96DV4 380 aaKnown RBP24.06■■□□□ 1.44
LRRK1-208ENST00000532029 HERC2P3Q9BVR0 1158 aa24.06■■□□□ 1.44
LRRK1-208ENST00000532029 GZF1Q9H116 711 aaPredicted RBP24.06■■□□□ 1.44
LRRK1-208ENST00000532029 METTL14Q9HCE5 456 aaKnown RBP24.06■■□□□ 1.44
LRRK1-208ENST00000532029 ENTPD7Q9NQZ7 604 aa24.06■■□□□ 1.44
LRRK1-208ENST00000532029 LMCD1Q9NZU5 365 aa24.06■■□□□ 1.44
LRRK1-208ENST00000532029 ARMCX3Q9UH62 379 aaPredicted RBP24.06■■□□□ 1.44
LRRK1-208ENST00000532029 PLXNA4Q9HCM2 1894 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms