RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 YAF2Q8IY57 180 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 DIS3L2Q8IYB7 885 aaKnown RBP12.69□□□□□ -0.38
CMTM1-215ENST00000531885 LEMD2Q8NC56 503 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 NETO1Q8TDF5 533 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 DEPDC1BQ8WUY9 529 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 FAM3CQ92520 227 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 NELL1Q92832 810 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 KIFAP3Q92845 792 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 ZNF512Q96ME7 567 aaPredicted RBP12.69□□□□□ -0.38
CMTM1-215ENST00000531885 PPP1R10Q96QC0 940 aaKnown RBP12.69□□□□□ -0.38
CMTM1-215ENST00000531885 MTMR9Q96QG7 549 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 POLR3CQ9BUI4 534 aaPredicted RBP12.69□□□□□ -0.38
CMTM1-215ENST00000531885 CHRDQ9H2X0 955 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 F5P12259 2224 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 DCDC2BA2VCK2 349 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 K7ERI5 159 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 ZNF263O14978 683 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 RETP07949 1114 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 ATF2P15336 505 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 CYP11B2P19099 503 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 GDI1P31150 447 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 MCM7P33993 719 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 LRRC32Q14392 662 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 GRM2Q14416 872 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 SLC5A9Q2M3M2 681 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 TPGS2Q68CL5 300 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 APPL2Q8NEU8 664 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 FAM200AQ8TCP9 573 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 CSGALNACT1Q8TDX6 532 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 SMARCD2Q92925 531 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 E2F7Q96AV8 911 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 MSANTD3Q96H12 275 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 CHAMP1Q96JM3 812 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 PLA2G2FQ9BZM2 168 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 GPR88Q9GZN0 384 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 CCDC113Q9H0I3 377 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 SLITRK6Q9H5Y7 841 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 TRPV5Q9NQA5 729 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 ASAH2Q9NR71 780 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 TPCN1Q9ULQ1 816 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 PIAS3Q9Y6X2 628 aa12.68□□□□□ -0.38
CMTM1-215ENST00000531885 TTLL13PA6NNM8 815 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 BTBD18B2RXH4 712 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 I3L4J1 428 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 PODXLO00592 558 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 SPATA31C1P0DKV0 1188 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 MUTP22033 750 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 RPA1P27694 616 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 MARCKSP29966 332 aaPredicted RBP12.67□□□□□ -0.38
CMTM1-215ENST00000531885 BRCC3P46736 316 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 CXCL12P48061 93 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 SPEM2Q0P670 501 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 ZNF568Q3ZCX4 644 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 FAM78AQ5JUQ0 283 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 EEF1DP3Q658K8 133 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 ZNF280DQ6N043 979 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 MAMSTRQ6ZN01 415 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.67□□□□□ -0.38
CMTM1-215ENST00000531885 TCEAL8Q8IYN2 117 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 DDX1Q92499 740 aaKnown RBP12.67□□□□□ -0.38
CMTM1-215ENST00000531885 TNFRSF25Q93038 417 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 ASB16Q96NS5 453 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 TCHPQ9BT92 498 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 LMAN1LQ9HAT1 526 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 GOLGA2P5Q9HBQ8 144 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 ZNF334Q9HCZ1 680 aaPredicted RBP12.67□□□□□ -0.38
CMTM1-215ENST00000531885 MAFFQ9ULX9 164 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 INSL5Q9Y5Q6 135 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 STK24Q9Y6E0 443 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 NOTCH4Q99466 2003 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 COL4A3Q01955 1670 aa12.67□□□□□ -0.38
CMTM1-215ENST00000531885 SMIM28A0A1B0GU29 152 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 WDR27A2RRH5 827 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 CCDC169A6NNP5 214 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 MED24O75448 989 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 ABLIM3O94929 683 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 CPB1P15086 417 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 RPL9P32969 192 aaKnown RBP12.66□□□□□ -0.38
CMTM1-215ENST00000531885 CNR2P34972 360 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 GRM5P41594 1212 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 KPNA1P52294 538 aaPredicted RBP12.66□□□□□ -0.38
CMTM1-215ENST00000531885 FOSBP53539 338 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 DMP1Q13316 513 aaPredicted RBP12.66□□□□□ -0.38
CMTM1-215ENST00000531885 PLD1Q13393 1074 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 ORC2Q13416 577 aaPredicted RBP12.66□□□□□ -0.38
CMTM1-215ENST00000531885 GNL2Q13823 731 aaKnown RBP12.66□□□□□ -0.38
CMTM1-215ENST00000531885 SIM2Q14190 667 aaPredicted RBP12.66□□□□□ -0.38
CMTM1-215ENST00000531885 LPAL2Q16609 132 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 CTXN3Q4LDR2 81 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 PRSS36Q5K4E3 855 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 BSNDQ8WZ55 320 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 ACAP3Q96P50 834 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 KIFC3Q9BVG8 833 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 MRPL4Q9BYD3 311 aaKnown RBP12.66□□□□□ -0.38
CMTM1-215ENST00000531885 TNFSF13BQ9Y275 285 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 USP20Q9Y2K6 914 aa12.66□□□□□ -0.38
CMTM1-215ENST00000531885 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.65□□□□□ -0.38
CMTM1-215ENST00000531885 CTDNEP1O95476 244 aa12.65□□□□□ -0.38
CMTM1-215ENST00000531885 ADRB1P08588 477 aa12.65□□□□□ -0.38
CMTM1-215ENST00000531885 OR52Z1P0C646 297 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms