RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 NBEAQ8NFP9 2946 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 MYO16Q9Y6X6 1858 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 PKD1L2Q7Z442 2459 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 NUP205Q92621 2012 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 NUP210Q8TEM1 1887 aaPredicted RBP9.9□□□□□ -0.82
USF1-210ENST00000531842 CCDC194A0A1B0GVG4 234 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 K7ESF4 209 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 NCAM2O15394 837 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 B3GAT3O94766 335 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 DEXIO95424 95 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 TOP3BO95985 862 aaKnown RBP9.9□□□□□ -0.82
USF1-210ENST00000531842 MYL4P12829 197 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 SPINK2P20155 84 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 HSPA4P34932 840 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 MAGEA9P43362 315 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 RARRES1P49788 294 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 OSTNP61366 133 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 NCBP1Q09161 790 aaKnown RBP9.9□□□□□ -0.82
USF1-210ENST00000531842 TMEM132AQ24JP5 1023 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 PPP4R3AQ6IN85 833 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.9□□□□□ -0.82
USF1-210ENST00000531842 MAP4K3Q8IVH8 894 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 TRIM22Q8IYM9 498 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 HACE1Q8IYU2 909 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 ABCA7Q8IZY2 2146 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 CELF5Q8N6W0 485 aaKnown RBP9.9□□□□□ -0.82
USF1-210ENST00000531842 ZFYVE19Q96K21 471 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 ASB16Q96NS5 453 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 LRRC3BQ96PB8 259 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 NELL2Q99435 816 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 HSD17B14Q9BPX1 270 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 TRMT61BQ9BVS5 477 aaKnown RBP9.9□□□□□ -0.82
USF1-210ENST00000531842 ARRDC1-AS1Q9H2J1 176 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 CYP4F11Q9HBI6 524 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 CEP72Q9P209 647 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 KCNH3Q9ULD8 1083 aa9.9□□□□□ -0.82
USF1-210ENST00000531842 C1QTNF9BB2RNN3 333 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 PRRG1O14668 218 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 MEFVO15553 781 aaPredicted RBP9.89□□□□□ -0.83
USF1-210ENST00000531842 DKC1O60832 514 aaKnown RBP eCLIP9.89□□□□□ -0.83
USF1-210ENST00000531842 LRG1P02750 347 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 C1QTNF9P0C862 333 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 PTPN2P17706 415 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 PMLP29590 882 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 CXCL12P48061 93 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 EVCP57679 992 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 TEAD2Q15562 447 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 CSRP2Q16527 193 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 UVSSAQ2YD98 709 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 TCEAL6Q6IPX3 200 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 EXOC8Q8IYI6 725 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 DNASE1L2Q92874 299 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 TCEAL3Q969E4 200 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 PPP1R10Q96QC0 940 aaKnown RBP9.89□□□□□ -0.83
USF1-210ENST00000531842 C22orf23Q9BZE7 217 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 FZD8Q9H461 694 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 ZFP14Q9HCL3 533 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 GDE1Q9NZC3 331 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 ANGPTL2Q9UKU9 493 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 MRPS17Q9Y2R5 130 aaKnown RBP9.89□□□□□ -0.83
USF1-210ENST00000531842 INSL5Q9Y5Q6 135 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 DENND4CQ5VZ89 1909 aa9.89□□□□□ -0.83
USF1-210ENST00000531842 ARHGEF37A1IGU5 675 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 HEPACAM2A8MVW5 462 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 ARNTLO00327 626 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 CPLX1O14810 134 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 GIPC1O14908 333 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 EXTL3O43909 919 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 MED24O75448 989 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 DGAT1O75907 488 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 ABLIM3O94929 683 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 VNN2O95498 520 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 POU2F2P09086 479 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 OR4Q2P0C623 313 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 SPATA31C1P0DKV0 1188 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 PSMC3P17980 439 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 PSMA5P28066 241 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 TXKP42681 527 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 CCR3P51677 355 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 POU5F1BQ06416 359 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 SCRN1Q12765 414 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 TWF1Q12792 350 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 PRPF4BQ13523 1007 aaKnown RBP9.88□□□□□ -0.83
USF1-210ENST00000531842 PON2Q15165 354 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 UPP1Q16831 310 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 AASDHQ4L235 1098 aaPredicted RBP9.88□□□□□ -0.83
USF1-210ENST00000531842 NT5DC1Q5TFE4 455 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 CDCA2Q69YH5 1023 aaPredicted RBP9.88□□□□□ -0.83
USF1-210ENST00000531842 PPP4R3CPQ6ZMV5 832 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 CEP68Q76N32 757 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 SHKBP1Q8TBC3 707 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 ZSCAN18Q8TBC5 510 aaPredicted RBP9.88□□□□□ -0.83
USF1-210ENST00000531842 C18orf25Q96B23 403 aaPredicted RBP9.88□□□□□ -0.83
USF1-210ENST00000531842 ZMAT2Q96NC0 199 aaKnown RBP9.88□□□□□ -0.83
USF1-210ENST00000531842 NFKBIZQ9BYH8 718 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 FAM126AQ9BYI3 521 aaPredicted RBP9.88□□□□□ -0.83
USF1-210ENST00000531842 CCDC113Q9H0I3 377 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 CRISPLD1Q9H336 500 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 ANKEF1Q9NU02 776 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 PPP4R2Q9NY27 417 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms