RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 QRSL1Q9H0R6 528 aaKnown RBP5.5□□□□□ -1.53
USP47-211ENST00000531513 EPC1Q9H2F5 836 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 CYP4F11Q9HBI6 524 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 CCDC189A1A4V9 331 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 A6NNZ2 444 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 KIAA0355O15063 1070 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 NDUFS2O75306 463 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 ZBED1O96006 694 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 PFKMP08237 780 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 MTHFD2P13995 350 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 ZEB1P37275 1124 aaPredicted RBP5.49□□□□□ -1.53
USP47-211ENST00000531513 CASRP41180 1078 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 MANFP55145 182 aaKnown RBP5.49□□□□□ -1.53
USP47-211ENST00000531513 MRPS9P82933 396 aaKnown RBP5.49□□□□□ -1.53
USP47-211ENST00000531513 METTL24Q5JXM2 366 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 FAM83BQ5T0W9 1011 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 ESPNLQ6ZVH7 1005 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 UNC5BQ8IZJ1 945 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 ZBTB34Q8NCN2 500 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 DIS3LQ8TF46 1054 aaKnown RBP5.49□□□□□ -1.53
USP47-211ENST00000531513 MYEOVQ96EZ4 313 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 RAX2Q96IS3 184 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 HIST1H2AHQ96KK5 128 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 SLC2A13Q96QE2 648 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 MAP3K14Q99558 947 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 HIST1H2AJQ99878 128 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 NDC1Q9BTX1 674 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 LSM14BQ9BX40 385 aaKnown RBP5.49□□□□□ -1.53
USP47-211ENST00000531513 FAM204AQ9H8W3 233 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 PPCSQ9HAB8 311 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 PTPRHQ9HD43 1115 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 KLHL11Q9NVR0 708 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 ANKFY1Q9P2R3 1169 aa5.49□□□□□ -1.53
USP47-211ENST00000531513 TPP1O14773 563 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 SH3BP5O60239 455 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 SEC24DO94855 1032 aaPredicted RBP5.48□□□□□ -1.53
USP47-211ENST00000531513 PCDH8O95206 1070 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 CLEC2LP0C7M8 214 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 MYBP10242 640 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 OSMP13725 252 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 PDCP20941 246 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 CLK3P49761 638 aaKnown RBP5.48□□□□□ -1.53
USP47-211ENST00000531513 SLC5A3P53794 718 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 AK2P54819 239 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 KIF23Q02241 960 aaPredicted RBP5.48□□□□□ -1.53
USP47-211ENST00000531513 RALBP1Q15311 655 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.48□□□□□ -1.53
USP47-211ENST00000531513 INO80DQ53TQ3 878 aaPredicted RBP5.48□□□□□ -1.53
USP47-211ENST00000531513 STRIP1Q5VSL9 837 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 SYCE2Q6PIF2 218 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 FAM83AQ86UY5 434 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 GRAMD1CQ8IYS0 662 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 PRR18Q8N4B5 295 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 LILRA3Q8N6C8 439 aaPredicted RBP5.48□□□□□ -1.53
USP47-211ENST00000531513 ENAHQ8N8S7 591 aaPredicted RBP5.48□□□□□ -1.53
USP47-211ENST00000531513 GLB1L3Q8NCI6 653 aaPredicted RBP5.48□□□□□ -1.53
USP47-211ENST00000531513 OR5M3Q8NGP4 307 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 C1GALT1C1Q96EU7 318 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 TNIP3Q96KP6 325 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 NAA15Q9BXJ9 866 aaKnown RBP5.48□□□□□ -1.53
USP47-211ENST00000531513 WNT8AQ9H1J5 351 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 SERHL2Q9H4I8 314 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.48□□□□□ -1.53
USP47-211ENST00000531513 TRPM5Q9NZQ8 1165 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 TUBD1Q9UJT1 453 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 TMPRSS11EQ9UL52 423 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 EDARQ9UNE0 448 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 PCDHB6Q9Y5E3 794 aa5.48□□□□□ -1.53
USP47-211ENST00000531513 PRSS38A1L453 326 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 TUSC2O75896 110 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 NCR1O76036 304 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 FGAP02671 866 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 SLC5A1P13866 664 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 WNT3AP56704 352 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 CD69Q07108 199 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 LLGL1Q15334 1064 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 CSRP2Q16527 193 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 PITRM1Q5JRX3 1037 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 COLEC12Q5KU26 742 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 ERAP2Q6P179 960 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 CCDC62Q6P9F0 684 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 USP45Q70EL2 814 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 DOK3Q7L591 496 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 OVCH2Q7RTZ1 564 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 GDF7Q7Z4P5 450 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 LYSMD2Q8IV50 215 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 CDYL2Q8N8U2 506 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 PARD3BQ8TEW8 1205 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 PPM1EQ8WY54 764 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 COA7Q96BR5 231 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 MVB12AQ96EY5 273 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 MYD88Q99836 296 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 FDXACB1Q9BRP7 624 aaPredicted RBP5.47□□□□□ -1.53
USP47-211ENST00000531513 WDR11Q9BZH6 1224 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 PRDM13Q9H4Q3 707 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 NLRC4Q9NPP4 1024 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 PLCB1Q9NQ66 1216 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 ADARB2Q9NS39 739 aaKnown RBP5.47□□□□□ -1.53
USP47-211ENST00000531513 SERPINB13Q9UIV8 391 aa5.47□□□□□ -1.53
USP47-211ENST00000531513 CHST2Q9Y4C5 530 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms