RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 CLEC17AQ6ZS10 378 aa19.58■□□□□ 0.72
PTPN11-204ENST00000531326 GRASPQ7Z6J2 395 aaPredicted RBP19.58■□□□□ 0.72
PTPN11-204ENST00000531326 TBC1D17Q9HA65 648 aa19.58■□□□□ 0.72
PTPN11-204ENST00000531326 NUMBLQ9Y6R0 609 aa19.58■□□□□ 0.72
PTPN11-204ENST00000531326 SPTBN4Q9H254 2564 aa19.58■□□□□ 0.72
PTPN11-204ENST00000531326 DCHS1Q96JQ0 3298 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 STK25O00506 426 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 POLR2DO15514 142 aaKnown RBP19.57■□□□□ 0.72
PTPN11-204ENST00000531326 FSHRP23945 695 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 GUCY2CP25092 1073 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 MAPK7Q13164 816 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 DHX8Q14562 1220 aaKnown RBP19.57■□□□□ 0.72
PTPN11-204ENST00000531326 NT5DC1Q5TFE4 455 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 GPBP1Q86WP2 473 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 DAW1Q8N136 415 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 DEPTORQ8TB45 409 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 DHX58Q96C10 678 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 SNX27Q96L92 541 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 ADPGKQ9BRR6 497 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 RPP25Q9BUL9 199 aaKnown RBP19.57■□□□□ 0.72
PTPN11-204ENST00000531326 GOLPH3LQ9H4A5 285 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 KCNH3Q9ULD8 1083 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 GDAQ9Y2T3 454 aa19.57■□□□□ 0.72
PTPN11-204ENST00000531326 NOTCH4Q99466 2003 aa19.56■□□□□ 0.72
PTPN11-204ENST00000531326 NPHP3-ACAD11A0A0J9YXS1 232 aa19.56■□□□□ 0.72
PTPN11-204ENST00000531326 C8AP07357 584 aa19.56■□□□□ 0.72
PTPN11-204ENST00000531326 CD300LGQ6UXG3 332 aa19.56■□□□□ 0.72
PTPN11-204ENST00000531326 FSIP1Q8NA03 581 aa19.56■□□□□ 0.72
PTPN11-204ENST00000531326 IQUBQ8NA54 791 aa19.56■□□□□ 0.72
PTPN11-204ENST00000531326 FGF14Q92915 247 aa19.56■□□□□ 0.72
PTPN11-204ENST00000531326 SLC2A4RGQ9NR83 387 aa19.56■□□□□ 0.72
PTPN11-204ENST00000531326 KCND2Q9NZV8 630 aa19.56■□□□□ 0.72
PTPN11-204ENST00000531326 WDR87Q6ZQQ6 2873 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 CCL16O15467 120 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 HIP1RO75146 1068 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 HNRNPA1P09651 372 aaKnown RBP eCLIP19.55■□□□□ 0.72
PTPN11-204ENST00000531326 NDUFA8P51970 172 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 ELAVL2Q12926 359 aaKnown RBP19.55■□□□□ 0.72
PTPN11-204ENST00000531326 PPP2R5AQ15172 486 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 GLRA4Q5JXX5 417 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 PPM1LQ5SGD2 360 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 LIN9Q5TKA1 542 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 PHLDB3Q6NSJ2 640 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 PARM1Q6UWI2 310 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 PPP1R10Q96QC0 940 aaKnown RBP19.55■□□□□ 0.72
PTPN11-204ENST00000531326 TIPINQ9BVW5 301 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 CUEDC2Q9H467 287 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 ARHGEF3Q9NR81 526 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 DLGAP2Q9P1A6 1054 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 CDH7Q9ULB5 785 aa19.55■□□□□ 0.72
PTPN11-204ENST00000531326 ZFP37Q9Y6Q3 630 aaPredicted RBP19.55■□□□□ 0.72
PTPN11-204ENST00000531326 TMEM189-UBE2V1I3L0A0 370 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 ACTN4O43707 911 aaKnown RBP19.54■□□□□ 0.72
PTPN11-204ENST00000531326 DCNP07585 359 aaKnown RBP19.54■□□□□ 0.72
PTPN11-204ENST00000531326 FGFR3P22607 806 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 HOXA9P31269 272 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 CACNB1Q02641 598 aaPredicted RBP19.54■□□□□ 0.72
PTPN11-204ENST00000531326 RAD51AP2Q09MP3 1159 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 RAB33AQ14088 237 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 DCAF4L1Q3SXM0 396 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 ATF7IP2Q5U623 682 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 RSPO2Q6UXX9 243 aaPredicted RBP19.54■□□□□ 0.72
PTPN11-204ENST00000531326 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.54■□□□□ 0.72
PTPN11-204ENST00000531326 SV2BQ7L1I2 683 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 ADSSL1Q8N142 457 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 SLC7A14Q8TBB6 771 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 KIFAP3Q92845 792 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 PYM1Q9BRP8 204 aaKnown RBP19.54■□□□□ 0.72
PTPN11-204ENST00000531326 GOLGA2P5Q9HBQ8 144 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 KBTBD4Q9NVX7 518 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 COL4A3Q01955 1670 aa19.54■□□□□ 0.72
PTPN11-204ENST00000531326 GVINP1Q7Z2Y8 2422 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 MYMKA6NI61 221 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 GADD45BO75293 160 aaPredicted RBP19.53■□□□□ 0.72
PTPN11-204ENST00000531326 RFX1P22670 979 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 OR1D2P34982 312 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 CLCNKBP51801 687 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 EFNA5P52803 228 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 GPC5P78333 572 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 PDXDC1Q6P996 788 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 CEP120Q8N960 986 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 C3orf58Q8NDZ4 430 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 ITFG1Q8TB96 612 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 FGF13Q92913 245 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 IFT74Q96LB3 600 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 REEP2Q9BRK0 252 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 HCFC1R1Q9NWW0 138 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 MTRRQ9UBK8 725 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 SERTAD1Q9UHV2 236 aa19.53■□□□□ 0.72
PTPN11-204ENST00000531326 GOLGA6L4A6NEF3 574 aa19.52■□□□□ 0.72
PTPN11-204ENST00000531326 SFI1A8K8P3 1242 aa19.52■□□□□ 0.72
PTPN11-204ENST00000531326 B3GAT3O94766 335 aa19.52■□□□□ 0.72
PTPN11-204ENST00000531326 SYKP43405 635 aa19.52■□□□□ 0.72
PTPN11-204ENST00000531326 UPP1Q16831 310 aa19.52■□□□□ 0.72
PTPN11-204ENST00000531326 DCLRE1AQ6PJP8 1040 aa19.52■□□□□ 0.72
PTPN11-204ENST00000531326 DNAJC19Q96DA6 116 aa19.52■□□□□ 0.72
PTPN11-204ENST00000531326 DRC1Q96MC2 740 aa19.52■□□□□ 0.72
PTPN11-204ENST00000531326 FOXQ1Q9C009 403 aa19.52■□□□□ 0.72
PTPN11-204ENST00000531326 TNMDQ9H2S6 317 aa19.52■□□□□ 0.72
PTPN11-204ENST00000531326 ODF2LQ9ULJ1 636 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms