RNA–Protein interactions for RNA: ENST00000531051.6

PSMC3-210, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 5

Gene PSMC3, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-210	ENST00000531051	PDE12	Q6L8Q7	609 aa	Known RBP	13.8	□□□□□ -0.2
PSMC3-210	ENST00000531051	KANK3	Q6NY19	840 aa		13.8	□□□□□ -0.2
PSMC3-210	ENST00000531051	DCLRE1A	Q6PJP8	1040 aa		13.8	□□□□□ -0.2
PSMC3-210	ENST00000531051	EFCAB13	Q8IY85	973 aa		13.8	□□□□□ -0.2
PSMC3-210	ENST00000531051	RNF168	Q8IYW5	571 aa	Predicted RBP	13.8	□□□□□ -0.2
PSMC3-210	ENST00000531051	EFHB	Q8N7U6	833 aa		13.8	□□□□□ -0.2
PSMC3-210	ENST00000531051	FEZF2	Q8TBJ5	459 aa		13.8	□□□□□ -0.2
PSMC3-210	ENST00000531051	CCDC47	Q96A33	483 aa	Known RBP	13.8	□□□□□ -0.2
PSMC3-210	ENST00000531051	PLEKHA5	Q9HAU0	1116 aa		13.8	□□□□□ -0.2
PSMC3-210	ENST00000531051	PDE11A	Q9HCR9	933 aa		13.8	□□□□□ -0.2
PSMC3-210	ENST00000531051	MRPL17	Q9NRX2	175 aa	Known RBP	13.8	□□□□□ -0.2
PSMC3-210	ENST00000531051	UBE4B	O95155	1302 aa		13.8	□□□□□ -0.2
PSMC3-210	ENST00000531051	UNC80	Q8N2C7	3258 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	CARNS1	A5YM72	827 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	EXTL3	O43909	919 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	MYL1	P05976	194 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	ADRB2	P07550	413 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	SPATA31D3	P0C874	917 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	EPCAM	P16422	314 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	KLRC2	P26717	231 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	TKT	P29401	623 aa	Known RBP	13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	MCM4	P33991	863 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	TFAM	Q00059	246 aa	Known RBP	13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	BMS1	Q14692	1282 aa	Known RBP	13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	ZBTB6	Q15916	424 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	KNOP1	Q1ED39	458 aa	Known RBP	13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	BMT2	Q1RMZ1	405 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	USP41	Q3LFD5	358 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	KIAA0319	Q5VV43	1072 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	SPATA31D4	Q6ZUB0	917 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	PALB2	Q86YC2	1186 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	BRSK2	Q8IWQ3	736 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	GPD1L	Q8N335	351 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	UROC1	Q96N76	676 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	KLHL5	Q96PQ7	755 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	CDH22	Q9UJ99	828 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	UBQLN1	Q9UMX0	589 aa	Known RBP	13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	COG5	Q9UP83	839 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	NUB1	Q9Y5A7	615 aa		13.79	□□□□□ -0.2
PSMC3-210	ENST00000531051	TEX28	O15482	410 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	LILRB3	O75022	631 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	RHOBTB3	O94955	611 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	MRPS5	P82675	430 aa	Known RBP	13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	DSG1	Q02413	1049 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	PSMD2	Q13200	908 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	COL19A1	Q14993	1142 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	CTC1	Q2NKJ3	1217 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	SPATA1	Q5VX52	437 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	HS2ST1	Q7LGA3	356 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	C12orf76	Q8N812	135 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	BEST2	Q8NFU1	509 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	SMARCE1	Q969G3	411 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	DDX27	Q96GQ7	796 aa	Known RBP	13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	CCDC34	Q96HJ3	373 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	NECAB3	Q96P71	396 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	ASB2	Q96Q27	587 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	TTPAL	Q9BTX7	342 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	CHST7	Q9NS84	486 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	CLEC1B	Q9P126	229 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	PCDHA5	Q9Y5H7	936 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	HCFC2	Q9Y5Z7	792 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	PTPRJ	Q12913	1337 aa		13.78	□□□□□ -0.2
PSMC3-210	ENST00000531051	TMEM189-UBE2V1	I3L0A0	370 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	BIN1	O00499	593 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	ADAM12	O43184	909 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	IL18RAP	O95256	599 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	WEE2	P0C1S8	567 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	RPL9	P32969	192 aa	Known RBP	13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	CDR1	P51861	262 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	UBE2H	P62256	183 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	PSMD5	Q16401	504 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	CAMK4	Q16566	473 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	C9orf57	Q5W0N0	161 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	CCDC127	Q96BQ5	260 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	TIGD1	Q96MW7	591 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	EMILIN2	Q9BXX0	1053 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	KCTD10	Q9H3F6	313 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	DPP3	Q9NY33	737 aa		13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.77	□□□□□ -0.21
PSMC3-210	ENST00000531051	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	XIRP2	A4UGR9	3374 aa		13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	GRXCR2	A6NFK2	248 aa		13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	ZNF233	A6NK53	670 aa		13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	SPDYE4	A6NLX3	237 aa		13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	SPTLC1	O15269	473 aa		13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	XPOT	O43592	962 aa	Known RBP	13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	EXOC3	O60645	756 aa		13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	SMC2	O95347	1197 aa		13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	LDHA	P00338	332 aa	Known RBP	13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	IL9	P15248	144 aa		13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	FGFR3	P22607	806 aa		13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	CASP4	P49662	377 aa		13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	KCNB1	Q14721	858 aa		13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	SNRNP35	Q16560	246 aa	Known RBP	13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMC3-210	ENST00000531051	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms