RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 DNAAF5Q86Y56 855 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 ADGRA3Q8IWK6 1321 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 SIX5Q8N196 739 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 CMTR1Q8N1G2 835 aaKnown RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 PPP1R14CQ8TAE6 165 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 ACTRT2Q8TDY3 377 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 PRR11Q96HE9 360 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 HES6Q96HZ4 224 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 EGLN2Q96KS0 407 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 BIRC8Q96P09 236 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 MRPS26Q9BYN8 205 aaKnown RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 MTRF1LQ9UGC7 380 aaKnown RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 GRID1Q9ULK0 1009 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 AK5Q9Y6K8 562 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 TLL2Q9Y6L7 1015 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 COL18A1P39060 1754 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 NID2Q14112 1375 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 B4E1Z4 1266 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 KLRF2D3W0D1 207 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 K7EPI3 171 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 DEXIO95424 95 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 IGKV5-2P06315 115 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 CETPP11597 493 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 CDH3P22223 829 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 TCEA1P23193 301 aaKnown RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 PPARGP37231 505 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 ACTR3P61158 418 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 NCOA4Q13772 614 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 DHX34Q14147 1143 aaKnown RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 MAN2A1Q16706 1144 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 LRRC36Q1X8D7 754 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 TMEM67Q5HYA8 995 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 DCAF12L1Q5VU92 463 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 FYB2Q5VWT5 728 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 LPCAT4Q643R3 524 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 CCSAPQ6IQ19 270 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 ISLR2Q6UXK2 745 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 ADAT2Q7Z6V5 191 aaKnown RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 NT5DC3Q86UY8 548 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 SRRM1Q8IYB3 904 aaKnown RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 TRIM22Q8IYM9 498 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 CENPSQ8N2Z9 138 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 SPATA5Q8NB90 893 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 FAM172AQ8WUF8 416 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 TMEM87BQ96K49 555 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 SPATA17Q96L03 361 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 FAM161BQ96MY7 647 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 RUNDC3BQ96NL0 473 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 MRPL1Q9BYD6 325 aaKnown RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 LIN28AQ9H9Z2 209 aaKnown RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 GPAMQ9HCL2 828 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 ARHGEF4Q9NR80 690 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 PLK2Q9NYY3 685 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 NOTOA8MTQ0 251 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 TMEM114B3SHH9 223 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 MAGEC1O60732 1142 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 ACSL3O95573 720 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 APOEP02649 317 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 LDHCP07864 332 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 ATP6V1B1P15313 513 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 ZNF12P17014 697 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 PON1P27169 355 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 PHBP35232 272 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 GSSP48637 474 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 CSE1LP55060 971 aaKnown RBP8.23□□□□□ -1.09
PTPRK-219ENST00000531050 IFIT5Q13325 482 aaKnown RBP8.23□□□□□ -1.09
PTPRK-219ENST00000531050 APOFQ13790 326 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 PDIA6Q15084 440 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 PPP2R5BQ15173 497 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 TTC38Q5R3I4 469 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 FAM83BQ5T0W9 1011 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 NIPAL1Q6NVV3 410 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 PAOXQ6QHF9 649 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 TRMT10CQ7L0Y3 403 aaKnown RBP8.23□□□□□ -1.09
PTPRK-219ENST00000531050 OTOAQ7RTW8 1153 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 RAVER1Q8IY67 606 aaKnown RBP8.23□□□□□ -1.09
PTPRK-219ENST00000531050 ESX1Q8N693 406 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 DENND1AQ8TEH3 1009 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 EME1Q96AY2 570 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 CTRCQ99895 268 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 TUBB6Q9BUF5 446 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 CDC42EP4Q9H3Q1 356 aaKnown RBP8.23□□□□□ -1.09
PTPRK-219ENST00000531050 SEMA6BQ9H3T3 888 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 MAN1C1Q9NR34 630 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 GIN1Q9NXP7 522 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 RRN3Q9NYV6 651 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 LGALS13Q9UHV8 139 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 PCDHGB4Q9UN71 923 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 NEU2Q9Y3R4 380 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 PCDHGB5Q9Y5G0 923 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 SLC4A4Q9Y6R1 1079 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 MEGF6O75095 1541 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 FAM47DPA6NHR8 397 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 ANKRD63C9JTQ0 380 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 AQP9O43315 295 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 DNAJC6O75061 913 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 FGFR1OPO95684 399 aaKnown RBP8.23□□□□□ -1.09
PTPRK-219ENST00000531050 XIAPP98170 497 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 STK4Q13043 487 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms