RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 SPATA1Q5VX52 437 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 JADE1Q6IE81 842 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 RBM43Q6ZSC3 357 aaKnown RBP16.58■□□□□ 0.24
CCS-206ENST00000530961 DDX53Q86TM3 631 aaKnown RBP16.58■□□□□ 0.24
CCS-206ENST00000530961 RDH13Q8NBN7 331 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 BEST2Q8NFU1 509 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 CACTINQ8WUQ7 758 aaKnown RBP16.58■□□□□ 0.24
CCS-206ENST00000530961 ALG13Q9NP73 1137 aaKnown RBP16.58■□□□□ 0.24
CCS-206ENST00000530961 FRMD4BQ9Y2L6 1034 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 PRG3Q9Y2Y8 225 aaPredicted RBP16.58■□□□□ 0.24
CCS-206ENST00000530961 MICAL3Q7RTP6 2002 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 BICDL2A1A5D9 508 aa16.57■□□□□ 0.24
CCS-206ENST00000530961 PI4K2BG5E9Z4 385 aa16.57■□□□□ 0.24
CCS-206ENST00000530961 TMEM189-UBE2V1I3L0A0 370 aa16.57■□□□□ 0.24
CCS-206ENST00000530961 GRM6O15303 877 aa16.57■□□□□ 0.24
CCS-206ENST00000530961 TADA2AO75478 443 aa16.57■□□□□ 0.24
CCS-206ENST00000530961 CD44P16070 742 aaKnown RBP16.57■□□□□ 0.24
CCS-206ENST00000530961 LRPAP1P30533 357 aa16.57■□□□□ 0.24
CCS-206ENST00000530961 FKBP3Q00688 224 aaKnown RBP16.57■□□□□ 0.24
CCS-206ENST00000530961 SPAG1Q07617 926 aa16.57■□□□□ 0.24
CCS-206ENST00000530961 PSMD6Q15008 389 aa16.57■□□□□ 0.24
CCS-206ENST00000530961 PDE12Q6L8Q7 609 aaKnown RBP16.57■□□□□ 0.24
CCS-206ENST00000530961 TMEM173Q86WV6 379 aaPredicted RBP16.57■□□□□ 0.24
CCS-206ENST00000530961 GDPD5Q8WTR4 605 aa16.57■□□□□ 0.24
CCS-206ENST00000530961 POF1BQ8WVV4 589 aa16.57■□□□□ 0.24
CCS-206ENST00000530961 SYAP1Q96A49 352 aaPredicted RBP16.57■□□□□ 0.24
CCS-206ENST00000530961 C18orf25Q96B23 403 aaPredicted RBP16.57■□□□□ 0.24
CCS-206ENST00000530961 MRPL38Q96DV4 380 aaKnown RBP16.57■□□□□ 0.24
CCS-206ENST00000530961 MFSD14AQ96MC6 490 aa16.57■□□□□ 0.24
CCS-206ENST00000530961 FNBP1Q96RU3 617 aa16.57■□□□□ 0.24
CCS-206ENST00000530961 CETN3O15182 167 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 B3GAT3O94766 335 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 NFICP08651 508 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 PAX3P23760 479 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 PSMC2P35998 433 aaKnown RBP16.56■□□□□ 0.24
CCS-206ENST00000530961 CLCNKBP51801 687 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 SOX4Q06945 474 aaPredicted RBP16.56■□□□□ 0.24
CCS-206ENST00000530961 CYP24A1Q07973 514 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 ELAVL2Q12926 359 aaKnown RBP16.56■□□□□ 0.24
CCS-206ENST00000530961 KLHL40Q2TBA0 621 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 CEP135Q66GS9 1140 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 ANKRD40Q6AI12 368 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 USP37Q86T82 979 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 PAAF1Q9BRP4 392 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 PDE11AQ9HCR9 933 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 NGRNQ9NPE2 291 aaKnown RBP16.56■□□□□ 0.24
CCS-206ENST00000530961 MARCH5Q9NX47 278 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 DACH1Q9UI36 760 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 ADAM28Q9UKQ2 775 aa16.56■□□□□ 0.24
CCS-206ENST00000530961 PODXLO00592 558 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 TRAPPC3O43617 180 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 NLRP12P59046 1061 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 TFAMQ00059 246 aaKnown RBP16.55■□□□□ 0.24
CCS-206ENST00000530961 ENPEPQ07075 957 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 PAK1Q13153 545 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 SKIV2LQ15477 1246 aaKnown RBP16.55■□□□□ 0.24
CCS-206ENST00000530961 DUOXA2Q1HG44 320 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 SKOR2Q2VWA4 1001 aaPredicted RBP16.55■□□□□ 0.24
CCS-206ENST00000530961 CT47A1Q5JQC4 288 aaPredicted RBP16.55■□□□□ 0.24
CCS-206ENST00000530961 KLHL10Q6JEL2 608 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 WDR49Q8IV35 697 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 BCL7CQ8WUZ0 217 aaPredicted RBP16.55■□□□□ 0.24
CCS-206ENST00000530961 NELFBQ8WX92 580 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 MKNK1Q9BUB5 465 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 GOLGA2P5Q9HBQ8 144 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 TLR9Q9NR96 1032 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 DPP3Q9NY33 737 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 TUBGCP4Q9UGJ1 667 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 MTCH2Q9Y6C9 303 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 TCHHQ07283 1943 aa16.55■□□□□ 0.24
CCS-206ENST00000530961 SF3B1O75533 1304 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCS-206ENST00000530961 ZDBF2Q9HCK1 2354 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 TULP1O00294 542 aaPredicted RBP16.54■□□□□ 0.24
CCS-206ENST00000530961 KIF4AO95239 1232 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 EFEMP2O95967 443 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 SOD2P04179 222 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 DLATP10515 647 aaKnown RBP16.54■□□□□ 0.24
CCS-206ENST00000530961 CASP4P49662 377 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 AP3M2P53677 418 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 PMS1P54277 932 aaKnown RBP16.54■□□□□ 0.24
CCS-206ENST00000530961 WNT7BP56706 349 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 CAMK1Q14012 370 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 FUT10Q6P4F1 479 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 INTS8Q75QN2 995 aaKnown RBP16.54■□□□□ 0.24
CCS-206ENST00000530961 ZC3H3Q8IXZ2 948 aaKnown RBP16.54■□□□□ 0.24
CCS-206ENST00000530961 EFCAB13Q8IY85 973 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 GPR65Q8IYL9 337 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 VPS52Q8N1B4 723 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 TMC2Q8TDI7 906 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 MICAL1Q8TDZ2 1067 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 RABGGTAQ92696 567 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 CCDC127Q96BQ5 260 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 ANKRD36BP1Q96IX9 119 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 INTS13Q9NVM9 706 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 CACNG4Q9UBN1 327 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 RWDD2AQ9UIY3 292 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 SSX2IPQ9Y2D8 614 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 XIRP2A4UGR9 3374 aa16.54■□□□□ 0.24
CCS-206ENST00000530961 ANO9A1A5B4 782 aa16.53■□□□□ 0.24
CCS-206ENST00000530961 IKBKBO14920 756 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms