RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 VPS52Q8N1B4 723 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 FAM133AQ8N9E0 248 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 ZFP28Q8NHY6 868 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 MAML1Q92585 1016 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 CASP10Q92851 521 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 GOLPH3Q9H4A6 298 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 ARL8BQ9NVJ2 186 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 SENP1Q9P0U3 644 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 KANSL3Q9P2N6 904 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 TRAF3IP3Q9Y228 551 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 RTCBQ9Y3I0 505 aaKnown RBP8.62□□□□□ -1.03
CSDE1-214ENST00000530886 COL4A3BPQ9Y5P4 624 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 DOT1LQ8TEK3 1739 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 hCG_1642624A0A1W2PR95 340 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 CASQ2O14958 399 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 HGSO14964 777 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 EDIL3O43854 480 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 IL1BP01584 269 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 ABHD2P08910 425 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 CALM1P0DP23 149 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 CALM2P0DP24 149 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 CALM3P0DP25 149 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 ZNF12P17014 697 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 SLC5A2P31639 672 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 UBA7P41226 1012 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 CAV1Q03135 178 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 PPIDQ08752 370 aaKnown RBP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 DNAJC3Q13217 504 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 TRIM28Q13263 835 aaKnown RBP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 STAT4Q14765 748 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 FYB2Q5VWT5 728 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 METTL25Q8N6Q8 603 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 PRELID2Q8N945 189 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 EFHD2Q96C19 240 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 OSBPL8Q9BZF1 889 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 MLXIPLQ9NP71 852 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 UBAP1Q9NZ09 502 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 PLA2G4CQ9UP65 541 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 SPO11Q9Y5K1 396 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 TNKSO95271 1327 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 TNRC6CQ9HCJ0 1690 aaKnown RBP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 RASA2Q15283 850 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 PFKFB3Q16875 520 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 NADK2Q4G0N4 442 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 OTOAQ7RTW8 1153 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 ADGRA1Q86SQ6 560 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 TRIM59Q8IWR1 403 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 LCORLQ8N3X6 602 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 KCNH5Q8NCM2 988 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 ATP6V0A1Q93050 837 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 HPS3Q969F9 1004 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.61□□□□□ -1.031e-11■■□□□ 14.1
CSDE1-214ENST00000530886 NAALADL1Q9UQQ1 740 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 GIT1Q9Y2X7 761 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 GPC6Q9Y625 555 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 TM7SF2O76062 418 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 TGDSO95455 350 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 CLPTM1O96005 669 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 TMEM253P0C7T8 217 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 TATP17735 454 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 ASIC1P78348 528 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 TXNRD1Q16881 649 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 SMUG1Q53HV7 270 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 PIK3AP1Q6ZUJ8 805 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 DHDDSQ86SQ9 333 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 ZNF410Q86VK4 478 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 PROSER2Q86WR7 435 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 TRIM50Q86XT4 487 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 TMPRSS6Q8IU80 811 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 AHI1Q8N157 1196 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 DDX12PQ92771 950 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 C18orf8Q96DM3 657 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 PPP1R10Q96QC0 940 aaKnown RBP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 TSG101Q99816 390 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 SYT11Q9BT88 431 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 PCDH11YQ9BZA8 1340 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 KLHL4Q9C0H6 718 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 MRPL46Q9H2W6 279 aaKnown RBP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 SH3GLB2Q9NR46 395 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 ARHGEF4Q9NR80 690 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 ANKFY1Q9P2R3 1169 aa8.61□□□□□ -1.03
CSDE1-214ENST00000530886 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 V9GY48 417 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-214ENST00000530886 FUOMA2VDF0 154 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 MIF4GDA9UHW6 222 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 ADAM23O75077 832 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 PLCG1P19174 1290 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 EPS15P42566 896 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 RASGRF1Q13972 1273 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 DLGAP5Q15398 846 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 TGFBIQ15582 683 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 C6orf163Q5TEZ5 329 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 TTC27Q6P3X3 843 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 RAPH1Q70E73 1250 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 TRABD2AQ86V40 505 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 RASSF3Q86WH2 238 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 LARGE2Q8N3Y3 721 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 SLC30A5Q8TAD4 765 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 RIN3Q8TB24 985 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 CCDC110Q8TBZ0 833 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms