RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 PAPLNO95428 1278 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 C8AP07357 584 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 HNRNPA1P09651 372 aaKnown RBP eCLIP14.5□□□□□ -0.09
VPS28-211ENST00000530790 PDIA4P13667 645 aaKnown RBP14.5□□□□□ -0.09
VPS28-211ENST00000530790 GAP43P17677 238 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 IGFBP6P24592 240 aaPredicted RBP14.5□□□□□ -0.09
VPS28-211ENST00000530790 MCM4P33991 863 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 OR1D2P34982 312 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 TNFSF9P41273 254 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 RAB33AQ14088 237 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 PPM1LQ5SGD2 360 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 CD300LGQ6UXG3 332 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 BMP8AQ7Z5Y6 402 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 SUGP1Q8IWZ8 645 aaKnown RBP14.5□□□□□ -0.09
VPS28-211ENST00000530790 LINC00301Q8NCQ3 95 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 PBXIP1Q96AQ6 731 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 HVCN1Q96D96 273 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 PRKD2Q9BZL6 878 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 ST6GALNAC4Q9H4F1 302 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 RPF1Q9H9Y2 349 aaKnown RBP14.5□□□□□ -0.09
VPS28-211ENST00000530790 SEL1LQ9UBV2 794 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 BACE2Q9Y5Z0 518 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 C2orf16Q68DN1 1984 aa14.5□□□□□ -0.09
VPS28-211ENST00000530790 VWA8A3KMH1 1905 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 MYH15Q9Y2K3 1946 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 A0A0B4J269 797 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 MYMKA6NI61 221 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 SPTLC2O15270 562 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 FAM189A1O60320 539 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 PPP6R2O75170 966 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 YEATS4O95619 227 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 HOXA9P31269 272 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 GBP2P32456 591 aaPredicted RBP14.49□□□□□ -0.09
VPS28-211ENST00000530790 PLA2G5P39877 138 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 SPAG1Q07617 926 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 ENOX2Q16206 610 aaKnown RBP14.49□□□□□ -0.09
VPS28-211ENST00000530790 ZC2HC1CQ53FD0 456 aaPredicted RBP14.49□□□□□ -0.09
VPS28-211ENST00000530790 VARS2Q5ST30 1063 aaKnown RBP14.49□□□□□ -0.09
VPS28-211ENST00000530790 ZBTB41Q5SVQ8 909 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 FOXD4L5Q5VV16 416 aaPredicted RBP14.49□□□□□ -0.09
VPS28-211ENST00000530790 SLC39A4Q6P5W5 647 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 GET4Q7L5D6 327 aaPredicted RBP14.49□□□□□ -0.09
VPS28-211ENST00000530790 SLC7A14Q8TBB6 771 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 FOXD4L4Q8WXT5 416 aaPredicted RBP14.49□□□□□ -0.09
VPS28-211ENST00000530790 FAM122AQ96E09 287 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 MRPL44Q9H9J2 332 aaKnown RBP14.49□□□□□ -0.09
VPS28-211ENST00000530790 UBQLN1Q9UMX0 589 aaKnown RBP14.49□□□□□ -0.09
VPS28-211ENST00000530790 CITO14578 2027 aa14.49□□□□□ -0.09
VPS28-211ENST00000530790 A0A087X0B3 334 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 LACTBL1A8MY62 500 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 H7C4K7 107 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 XYLBO75191 536 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 IDEP14735 1019 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 CYP3A5P20815 502 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 AXDND1Q5T1B0 1012 aaPredicted RBP14.48□□□□□ -0.09
VPS28-211ENST00000530790 SLFN12LQ6IEE8 588 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 ZNF280DQ6N043 979 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 RSPO2Q6UXX9 243 aaPredicted RBP14.48□□□□□ -0.09
VPS28-211ENST00000530790 ZNF720Q7Z2F6 126 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 CD302Q8IX05 232 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 PDILTQ8N807 584 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 APPL2Q8NEU8 664 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 FAM212AQ96EL1 285 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 ASIC4Q96FT7 647 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 SUSD3Q96L08 255 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 TSPAN18Q96SJ8 248 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 CPSF3Q9UKF6 684 aaKnown RBP14.48□□□□□ -0.09
VPS28-211ENST00000530790 POLIQ9UNA4 740 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 TECTAO75443 2155 aa14.48□□□□□ -0.09
VPS28-211ENST00000530790 PDCD11Q14690 1871 aaKnown RBP14.48□□□□□ -0.09
VPS28-211ENST00000530790 CCL16O15467 120 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 N4BP1O75113 896 aaKnown RBP14.47□□□□□ -0.09
VPS28-211ENST00000530790 PPP1R37O75864 691 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 GCNT3O95395 438 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 F13A1P00488 732 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 POU2F2P09086 479 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 ZSCAN22P10073 491 aaPredicted RBP14.47□□□□□ -0.09
VPS28-211ENST00000530790 LRPAP1P30533 357 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 ROR1Q01973 937 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 ADALQ6DHV7 355 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 SLC8B1Q6J4K2 584 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 RTL10Q7L3V2 364 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 FBXL6Q8N531 539 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 DNAJC19Q96DA6 116 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 PANK2Q9BZ23 570 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 KCNH6Q9H252 994 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 SMOC2Q9H3U7 446 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 OLFML3Q9NRN5 406 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.47□□□□□ -0.092e-7■■■■□ 26
VPS28-211ENST00000530790 TBC1D7Q9P0N9 293 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 TFIP11Q9UBB9 837 aaKnown RBP14.47□□□□□ -0.09
VPS28-211ENST00000530790 EPS15L1Q9UBC2 864 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 AGO2Q9UKV8 859 aaKnown RBP14.47□□□□□ -0.09
VPS28-211ENST00000530790 PCDHB8Q9UN66 801 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 EXOC7Q9UPT5 735 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 TRIP11Q15643 1979 aa14.47□□□□□ -0.09
VPS28-211ENST00000530790 TISP43B9A030 160 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 ANKRD63C9JTQ0 380 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 FSHRP23945 695 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 ACOT2P49753 483 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms