RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 PTGDRQ13258 359 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 NOSTRINQ8IVI9 506 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 TRIM22Q8IYM9 498 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 TCEAL8Q8IYN2 117 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 SPEM1Q8N4L4 309 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 ZNF461Q8TAF7 563 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 OXER1Q8TDS5 423 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 IRF7Q92985 503 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 EIF2AK1Q9BQI3 630 aaKnown RBP11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 POLR3FQ9H1D9 316 aaPredicted RBP11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 TRPV4Q9HBA0 871 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 ZFP14Q9HCL3 533 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 GPRC5CQ9NQ84 441 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 RXFP3Q9NSD7 469 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 PIAS3Q9Y6X2 628 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 LOC400499M0QZD8 3231 aa11.79□□□□□ -0.52
TM9SF1-210ENST00000530563 SETXQ7Z333 2677 aaKnown RBP11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 I3L4J1 428 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 CCNT1O60563 726 aaKnown RBP11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 ATF2P15336 505 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 PSMC3P17980 439 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 GDI1P31150 447 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 CNR2P34972 360 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 BRCC3P46736 316 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 PPP2R5DQ14738 602 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 UPP1Q16831 310 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 EEF1DP3Q658K8 133 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 LONP2Q86WA8 852 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 FAM160A2Q8N612 972 aaPredicted RBP11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 SMARCD2Q92925 531 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 RSPRY1Q96DX4 576 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 CORO1BQ9BR76 489 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 CCDC113Q9H0I3 377 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 GJB4Q9NTQ9 266 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 RBM12Q9NTZ6 932 aaKnown RBP11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 PRMT7Q9NVM4 692 aaPredicted RBP11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 SMG1Q96Q15 3661 aaKnown RBP11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 SDK1Q7Z5N4 2213 aa11.78□□□□□ -0.52
TM9SF1-210ENST00000530563 FAM205CA6NFA0 338 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 B3GAT3O94766 335 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 HOXB3P14651 431 aaPredicted RBP11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 CCNE1P24864 410 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 HOXA6P31267 233 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 EPHA5P54756 1037 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 SOX4Q06945 474 aaPredicted RBP11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 MRPL58Q14197 206 aaKnown RBP11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 SF3A2Q15428 464 aaKnown RBP11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 Q6ZS52 159 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 ANKS3Q6ZW76 656 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 MFSD6LQ8IWD5 586 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 PIGOQ8TEQ8 1089 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 BSNDQ8WZ55 320 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 DDX1Q92499 740 aaKnown RBP11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 ZNF274Q96GC6 653 aaPredicted RBP11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 GOLGA2P5Q9HBQ8 144 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 CEP72Q9P209 647 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 TICRRQ7Z2Z1 1910 aa11.77□□□□□ -0.53
TM9SF1-210ENST00000530563 GCN1Q92616 2671 aaKnown RBP11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 RALGAPA1Q6GYQ0 2036 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 CCDC194A0A1B0GVG4 234 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 LRRIQ4A6NIV6 560 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 ACKR2O00590 384 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 ZNF197O14709 1029 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 N4BP3O15049 544 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 FOXD2O60548 495 aaPredicted RBP11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 LRG1P02750 347 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 PROS1P07225 676 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 SPATA31C1P0DKV0 1188 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 XRCC6P12956 609 aaKnown RBP eCLIP11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 COL9A2Q14055 689 aaPredicted RBP11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 XKR4Q5GH76 650 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 GLRA4Q5JXX5 417 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 TXNDC11Q6PKC3 985 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 ALKAL1Q6UXT8 129 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 PIK3AP1Q6ZUJ8 805 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 SLFN12Q8IYM2 578 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 DEPDC1BQ8WUY9 529 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 TNFRSF25Q93038 417 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 LRRC3BQ96PB8 259 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 LARP6Q9BRS8 491 aaKnown RBP11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 INSL5Q9Y5Q6 135 aa11.76□□□□□ -0.53
TM9SF1-210ENST00000530563 SMIM28A0A1B0GU29 152 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 WNT7AO00755 349 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 PRRG1O14668 218 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 USO1O60763 962 aaKnown RBP11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 ZNF806P0C7X5 589 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 GJA1P17302 382 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 RAP1GAPP47736 663 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 SOX9P48436 509 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 IRX6P78412 446 aaPredicted RBP11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 PRPF4BQ13523 1007 aaKnown RBP11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 PLA2G2CQ5R387 149 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 NT5DC1Q5TFE4 455 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 HEATR6Q6AI08 1181 aaKnown RBP11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 MAEAQ7L5Y9 396 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 WDR5BQ86VZ2 330 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 ZSCAN18Q8TBC5 510 aaPredicted RBP11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 UROC1Q96N76 676 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms