RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 POU5F1Q01860 360 aaKnown RBP18.34■□□□□ 0.53
SF3B2-209ENST00000530322 TPRNQ4KMQ1 711 aa18.34■□□□□ 0.53
SF3B2-209ENST00000530322 RTP2Q5QGT7 225 aa18.34■□□□□ 0.53
SF3B2-209ENST00000530322 FAM171A1Q5VUB5 890 aa18.34■□□□□ 0.53
SF3B2-209ENST00000530322 SYCE2Q6PIF2 218 aa18.34■□□□□ 0.53
SF3B2-209ENST00000530322 CRELD2Q6UXH1 353 aaPredicted RBP18.34■□□□□ 0.53
SF3B2-209ENST00000530322 PPFIBP1Q86W92 1011 aa18.34■□□□□ 0.53
SF3B2-209ENST00000530322 CD302Q8IX05 232 aa18.34■□□□□ 0.53
SF3B2-209ENST00000530322 ZNF507Q8TCN5 953 aa18.34■□□□□ 0.53
SF3B2-209ENST00000530322 RIN2Q8WYP3 895 aaPredicted RBP18.34■□□□□ 0.53
SF3B2-209ENST00000530322 KIF12Q96FN5 646 aa18.34■□□□□ 0.53
SF3B2-209ENST00000530322 TSPAN18Q96SJ8 248 aa18.34■□□□□ 0.53
SF3B2-209ENST00000530322 TUBGCP4Q9UGJ1 667 aa18.34■□□□□ 0.53
SF3B2-209ENST00000530322 CIZ1Q9ULV3 898 aaPredicted RBP18.34■□□□□ 0.53
SF3B2-209ENST00000530322 FAM50BQ9Y247 325 aa18.34■□□□□ 0.53
SF3B2-209ENST00000530322 NCOR1O75376 2440 aa18.34■□□□□ 0.53
SF3B2-209ENST00000530322 CUL9Q8IWT3 2517 aa18.33■□□□□ 0.53
SF3B2-209ENST00000530322 ADH1AP07327 375 aa18.33■□□□□ 0.52
SF3B2-209ENST00000530322 HOXB8P17481 243 aaPredicted RBP18.33■□□□□ 0.52
SF3B2-209ENST00000530322 SMAD2Q15796 467 aaKnown RBP18.33■□□□□ 0.52
SF3B2-209ENST00000530322 TMEM130Q8N3G9 435 aa18.33■□□□□ 0.52
SF3B2-209ENST00000530322 PIK3R5Q8WYR1 880 aa18.33■□□□□ 0.52
SF3B2-209ENST00000530322 FAM212AQ96EL1 285 aa18.33■□□□□ 0.52
SF3B2-209ENST00000530322 TTPALQ9BTX7 342 aa18.33■□□□□ 0.52
SF3B2-209ENST00000530322 S1PR5Q9H228 398 aa18.33■□□□□ 0.52
SF3B2-209ENST00000530322 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.33■□□□□ 0.52
SF3B2-209ENST00000530322 FNIP2Q9P278 1114 aa18.33■□□□□ 0.52
SF3B2-209ENST00000530322 UBQLN1Q9UMX0 589 aaKnown RBP18.33■□□□□ 0.52
SF3B2-209ENST00000530322 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.33■□□□□ 0.52
SF3B2-209ENST00000530322 MTCL1Q9Y4B5 1905 aaKnown RBP18.33■□□□□ 0.52
SF3B2-209ENST00000530322 MYL1P05976 194 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 CYP3A5P20815 502 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 FGFR3P22607 806 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 LRPAP1P30533 357 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 BRCC3P46736 316 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 CREMQ03060 361 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 JADE1Q6IE81 842 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 PRSS55Q6UWB4 352 aaPredicted RBP18.32■□□□□ 0.52
SF3B2-209ENST00000530322 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.32■□□□□ 0.52
SF3B2-209ENST00000530322 KRBA2Q6ZNG9 492 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 CEP57Q86XR8 500 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 ZSWIM2Q8NEG5 633 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 LNX1Q8TBB1 728 aaPredicted RBP18.32■□□□□ 0.52
SF3B2-209ENST00000530322 SCFD1Q8WVM8 642 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 CBWD1Q9BRT8 395 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 FAM213AQ9BRX8 229 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 ASB7Q9H672 318 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 SLC39A2Q9NP94 309 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 DERAQ9Y315 318 aa18.32■□□□□ 0.52
SF3B2-209ENST00000530322 USP15Q9Y4E8 981 aaPredicted RBP18.32■□□□□ 0.52
SF3B2-209ENST00000530322 UBE4BO95155 1302 aa18.31■□□□□ 0.52
SF3B2-209ENST00000530322 I3L4J1 428 aa18.31■□□□□ 0.52
SF3B2-209ENST00000530322 XPOTO43592 962 aaKnown RBP18.31■□□□□ 0.52
SF3B2-209ENST00000530322 TRAPPC3O43617 180 aa18.31■□□□□ 0.52
SF3B2-209ENST00000530322 ZNF202O95125 648 aa18.31■□□□□ 0.52
SF3B2-209ENST00000530322 LDHAP00338 332 aaKnown RBP18.31■□□□□ 0.52
SF3B2-209ENST00000530322 NFICP08651 508 aa18.31■□□□□ 0.52
SF3B2-209ENST00000530322 KMT5BQ4FZB7 885 aa18.31■□□□□ 0.52
SF3B2-209ENST00000530322 SPATA1Q5VX52 437 aa18.31■□□□□ 0.52
SF3B2-209ENST00000530322 ARMCX5Q6P1M9 558 aa18.31■□□□□ 0.52
SF3B2-209ENST00000530322 SUSD6Q92537 303 aa18.31■□□□□ 0.52
SF3B2-209ENST00000530322 SAAL1Q96ER3 474 aa18.31■□□□□ 0.52
SF3B2-209ENST00000530322 FBXL18Q96ME1 805 aa18.31■□□□□ 0.52
SF3B2-209ENST00000530322 DZANK1Q9NVP4 752 aa18.31■□□□□ 0.52
SF3B2-209ENST00000530322 PRR29P0C7W0 189 aa18.3■□□□□ 0.52
SF3B2-209ENST00000530322 RPL17P18621 184 aaKnown RBP18.3■□□□□ 0.52
SF3B2-209ENST00000530322 TKTP29401 623 aaKnown RBP18.3■□□□□ 0.52
SF3B2-209ENST00000530322 GUCY2FP51841 1108 aa18.3■□□□□ 0.52
SF3B2-209ENST00000530322 TMEM132DQ14C87 1099 aa18.3■□□□□ 0.52
SF3B2-209ENST00000530322 PSMD5Q16401 504 aa18.3■□□□□ 0.52
SF3B2-209ENST00000530322 BMT2Q1RMZ1 405 aa18.3■□□□□ 0.52
SF3B2-209ENST00000530322 PDXDC1Q6P996 788 aa18.3■□□□□ 0.52
SF3B2-209ENST00000530322 CLSTN3Q9BQT9 956 aa18.3■□□□□ 0.52
SF3B2-209ENST00000530322 APOL5Q9BWW9 433 aa18.3■□□□□ 0.52
SF3B2-209ENST00000530322 PCIF1Q9H4Z3 704 aa18.3■□□□□ 0.52
SF3B2-209ENST00000530322 EXOC1Q9NV70 894 aa18.3■□□□□ 0.52
SF3B2-209ENST00000530322 PRKAG3Q9UGI9 489 aa18.3■□□□□ 0.52
SF3B2-209ENST00000530322 C2CD2Q9Y426 696 aa18.3■□□□□ 0.52
SF3B2-209ENST00000530322 NUB1Q9Y5A7 615 aa18.3■□□□□ 0.52
SF3B2-209ENST00000530322 GOLGA8IPA6NC78 632 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 GOLGA8JA6NMD2 632 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 KIAA0391O15091 583 aaKnown RBP18.29■□□□□ 0.52
SF3B2-209ENST00000530322 TGFB1I1O43294 461 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 EXTL3O43909 919 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 IL18RAPO95256 599 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 GLUD1P00367 558 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 C1RP00736 705 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 ANP32AP39687 249 aaKnown RBP18.29■□□□□ 0.52
SF3B2-209ENST00000530322 WNT7BP56706 349 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 ITIH3Q06033 890 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 DPYDQ12882 1025 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 STK4Q13043 487 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 PSMD2Q13200 908 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 GLYCTKQ8IVS8 523 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 BRSK2Q8IWQ3 736 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 NELFCDQ8IXH7 590 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 FMR1NBQ8N0W7 255 aaPredicted RBP18.29■□□□□ 0.52
SF3B2-209ENST00000530322 KIAA0895Q8NCT3 520 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 BEST2Q8NFU1 509 aa18.29■□□□□ 0.52
SF3B2-209ENST00000530322 SUSD3Q96L08 255 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms